Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq12453 105 6e-18 >seq12453 Length=42053 Score = 105 bits (116), Expect = 6e-18 Identities = 237/356 (67%), Gaps = 0/356 (0%) Strand=Plus/Minus Query 38636 GCAATTTCTTCCAAGCACGCAATCTTCAATCCTTGACAGTTCTCAATAGTCTGCACGAAT 38695 || |||||||| || || || | || || ||||| | || |||| || || || || Sbjct 33834 GCTATTTCTTCTAAACAAGCCACTTTGAAGCCTTGGCGTTTTTCAACGGTTTGTACAAAA 33775 Query 38696 TGACCAGCTTCCATCAGACTGGCGTGTGTTCCTGTGTCAAGCCAAGTAAATCCTCGTCCG 38755 ||| || || || || || |||| || ||||| || | ||||| ||| || || ||| Sbjct 33774 GTACCCGCCTCAATGAGGCTATCGTGAGTGCCTGTATCCAACCAAGCAAAGCCACGACCG 33715 Query 38756 AGAACTTCCACTTGTAACTTCCTGTCTTCTAGGTAGCTGCGATTGATATCAGTGATCTCC 38815 || | ||| || | ||| | | ||||| || | | || || || || || Sbjct 33714 AGCAATTCAACGTTTAATTCACCACGTTCTAAATACATTTGGTTAATTGACGTAATTTCT 33655 Query 38816 AGTTCTCCACGCGCGGAAGGGGTTACTTCTAATGCACGTTGAATAACAGAGTTATCATAG 38875 | ||| || || | ||||| | |||| | |||| || || || ||||||| Sbjct 33654 AATTCACCGCGTTCAGAAGGTTTAACTTGTTTTGCAAATTCAACCACTTGTGAATCATAG 33595 Query 38876 AAATACAAACCTGTGACAGCATAATCTGATTTAGGATTTTCAGGTTTCTCTTCAATAGAA 38935 |||||||| ||||| || || ||| |||||||| || ||||| ||||||||||| Sbjct 33594 AAATACAACCCTGTCACCGCCCAATTGGATTTAGGTTTAAGCGGTTTTTCTTCAATAGAC 33535 Query 38936 ATAGCTTGACGATTACTCCCAAATTCAACCACACCGAATCGTTCAGGATCTTTCAC 38991 | ||| | |||| ||||||| || ||||| || || ||||| || |||| Sbjct 33534 AGTACTTTAAAATTATCGTCAAATTCCACAACACCAAAGCGCTCAGGGTCCATCAC 33479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470744628335520