Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq220453 140 6e-28 seq157614 140 6e-28 seq160110 104 5e-17 seq129547 100 6e-16 seq8809 95.1 2e-14 seq106419 89.7 1e-12 >seq220453 Length=1779 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| |||||||| || || || | ||| | || || |||||| ||||| Sbjct 801 ATACCACCTCGAAGACGTAGGACCAAGTGAAGAGTTGATTCCTTTTGGATATTGTAATCG 860 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || ||| |||| ||||||||||| ||||| || || | | || ||||| || Sbjct 861 GACAAGGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAAATGAGACGTTGCTGATCTGGA 920 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| || ||||| || ||| ||| ||||| |||| || || | || Sbjct 921 GGAATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATTCTCGATAGTGTCGGATGGCTCG 980 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||||| ||||| |||||||| || |||| || |||||||| Sbjct 981 ACTTCCAATGTAATAGTTTTTCCAGTTAAGGTCTTAACGAAGATCTGCAT 1030 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||||||| || || || | ||| | || || ||| || || ||| Sbjct 1485 ATACCACCTCGTAGACGTAGGACCAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAGTCA 1544 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| |||| || || || || ||||| |||| || ||||| || Sbjct 1545 GACAAGGTACGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAATCGTTGCTGATCTGGA 1604 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| |||||||| |||||| || || || || | || || | ||| Sbjct 1605 GGAATTCCTTCCTTATCTTGAATTTTAGCCTTGACGTTTTCAATGGTGTCAGAGGGTTCA 1664 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | |||||||||||||| || || ||||||| || |||||||| Sbjct 1665 ACCTCCAATGTAATGGTTTTACCGGTCAAAGTTTTAACGAAAATCTGCAT 1714 Score = 116 bits (128), Expect = 7e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | || || | ||| || || | || | || ||| || || |||||||| Sbjct 345 ATACCACCACGGAGGCGAAGTACCAAGTGAAGGGTTGATTCCTTTTGA-ATGTTATAATC 403 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || ||| |||| ||||||||||| ||||| || || | | || ||||| || Sbjct 404 GGAAAGAGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAAATGAGACGTTGCTGATCTGG 463 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || |||||||| || ||||| || ||| ||| ||||| |||| || || | || Sbjct 464 AGGAATTCCTTCCTTGTCTTGAATCTTAGCTTTAACATTCTCGATAGTGTCGGATGGCTC 523 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | ||||| ||||| |||||||| || |||| || |||||||| Sbjct 524 GACTTCCAATGTAATAGTTTTTCCAGTTAAGGTCTTAACGAAGATCTGCAT 574 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 ||||||||||| ||||| || || | | || ||||| || || |||||||| || ||| Sbjct 195 TCCAATTGTTTGCCAGCGAAAATGAGACGTTGCTGATCTGGGGGAATTCCTTCCTTGTCT 254 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || |||||| || || || |||| ||| || | ||| ||||| | ||||||||| Sbjct 255 TGGATTTTAGCCTTAACGTTTTCAATAGTATCGGAAGGTTCGACTTCCAAAGTAATGGTC 314 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || | || || | || |||||||| Sbjct 315 TTTCCGGTAAGAGTCTTCACGAAGATCTGCAT 346 >seq157614 Length=1694 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || |||| | ||||||||||||||| || |||| ||| || ||||||||||| || Sbjct 675 CCTCCTCGTAAACGTAATACTAAATGCAATGTAGACTCCTTCTGAATATTATAATCGGAC 616 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || || || |||| ||||||||||| || || || || || | || ||||| ||||| Sbjct 615 AAGGTGCGACCATCTTCCAATTGTTTTCCGGCGAAAATCAAACGTTGCTGATCTGGTGGG 556 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| |||||||| || ||| || ||||| || | ||| || | ||||||| Sbjct 555 ATGCCTTCCTTATCTTGGATCTTAGCCTTAACATTTTCAATGGTATCGGAAGGTTCTACT 496 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||||| || || ||||| ||||| || | || || ||||| Sbjct 495 TCCAACGTAATAGTCTTTCCAGTCAATGTCTTGACGAAGATTTGCAT 449 >seq160110 Length=3910 Score = 104 bits (114), Expect = 5e-17 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 50118 TACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTC- 50176 |||||||| ||||| || |||||| || ||||||||| |||||| | ||| || Sbjct 2780 TACATTTCGGAATGCACGTTTTCCATTGCAATTTGAAATCCATAAAAGCAACGTGCCTCA 2839 Query 50177 -TGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAG 50235 ||| | || || || | ||||||||| || | ||| || |||||| || |||| Sbjct 2840 GTGACT--TGCACCTCCTGACTGAATCGTTCCACAAGATTTTCGTTTACAATCCCGTCAG 2897 Query 50236 ATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTT 50295 ||||||||||||| ||||| || | || |||||| |||| || | | | || | Sbjct 2898 ATGCTGCGAAGAACGCTAATACATGAGAAACAAAATGGCGTTCACTAGATGTGAGGTTGT 2957 Query 50296 CCCAAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGG 50355 |||| || | ||| || || | ||| || || || | ||||||||||||||| ||| Sbjct 2958 TCCAATCATCCATATCCTTCGAAAGATCCACCTCCTCAACAGTCCAAAATGATGCTTCGG 3017 >seq129547 Length=22140 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||||| ||||| | || || || | | | |||||| ||| || || ||| Sbjct 20067 ATGCCACCTCGGAGACGGAGAACCAAGTGGAGGATCGACTCTTTCTGGATGTTGTAGTCA 20008 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| || || | || |||||||| || ||||| | ||| || | || ||||| ||| Sbjct 20007 GATAGAGTACGCCCGTCTTCCAATTGCTTTCCAGCGATGATCAACCGTTGCTGATCTGGT 19948 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||| | ||||||| |||| ||||||||| || | ||| || | ||| Sbjct 19947 GGAATGCCTGCCTTATCTTAGATTTGTGCTTTTACATTTTCAATGGTATCAGAGGGTTCA 19888 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 | || | ||||||||||||||||| | ||| || | || || ||||| Sbjct 19887 ATCTCCAAGGTAATGGTTTTACCAGTAAGTGTCTTCACGAAGATTTGCAT 19838 >seq8809 Length=5998 Score = 95.1 bits (104), Expect = 2e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 192345 CTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAA 192404 |||||| |||||| ||||| || | || ||| |||| ||||||||||| || || || Sbjct 4522 CTCTTTCTGGATATTGTAATCGGACAGAGTGCGTCCATCTTCCAATTGTTTGCCGGCGAA 4463 Query 192405 GATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATT 192464 ||| || | || || || || || ||||| ||||| ||||| || || ||| ||||| Sbjct 4462 GATCAAACGTTGCTGGTCTGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTGACATT 4403 Query 192465 AGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAAT 192524 |||| || || | || || || ||||| ||||| || || || | || || | Sbjct 4402 TTCGATAGTGTCCGAAGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTTAC 4343 Query 192525 AAATATCTGCAT 192536 || |||||||| Sbjct 4342 GAAAATCTGCAT 4331 >seq106419 Length=8549 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363 || |||||||||| ||||| | || || || | || | ||| || ||| || || Sbjct 1431 ATGATACCACCTCGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAG 1490 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 || || | || ||| |||| ||||||||||| || || ||||| || | || ||||| Sbjct 1491 TCCGAAAGGGTGCGTCCATCTTCCAATTGTTTGCCGGCGAAGATCAAACGTTGCTGATCT 1550 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || || ||||| || || || || || || ||||| || | ||||| | Sbjct 1551 GGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATGGTGTCTGATGGC 1610 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || || || ||||| || || || || || || | || ||||||||| Sbjct 1611 TCGACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACGAAAATCTGCATT 1664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980453773374600