Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq21991 129 7e-25 seq216702 87.8 2e-12 >seq21991 Length=9696 Score = 129 bits (142), Expect = 7e-25 Identities = 215/307 (70%), Gaps = 8/307 (3%) Strand=Plus/Plus Query 43394 GTTGCCCGATATGAAGAACAAAAACACAGTGTATTTGAAAAGCTGACTGAAAAACAACTG 43453 || || || ||||| | ||||| || | | ||||||||||||| |||||||||| || Sbjct 8219 GTGGCGCGCTATGATCAGCAAAAGTACCCTATTTTTGAAAAGCTGATTGAAAAACAATTG 8278 Query 43454 TCATTCTTCTGGCGACCGGAAGAAGTGGATCTGTCGATTGACCGTATGCAGT---ATGCG 43510 || || |||||||| || |||||||| || | || |||||||| | | ||||| Sbjct 8279 TCGTTTTTCTGGCGCCCTGAAGAAGTTGACGTATCTCGCGACCGTATTGACTATAATGCG 8338 Query 43511 AAAATGCCGGAACATGAAAAAATCATTTTCGATTCTAACCTGCAATATCAAACCCTACTG 43570 |||| || || |||||| ||||| ||| ||| |||| ||||| || ||| Sbjct 8339 ---TTGCCAGATCACGAAAAACATATTTTTATCAGTAATCTGAAATACCAAACGCTGCTG 8395 Query 43571 GATACCATTCAGGGACGCGGCCCTAACCTTGCATTTCTCCCGATTGCCTCTGATGTATCA 43630 || | |||||||| ||| ||||||| | ||||| | ||| || | ||| | | Sbjct 8396 GACTCTATTCAGGGCCGCAGCCCTAATGTGGCATTATTGCCG-CTGATTTCGATTCCTGA 8454 Query 43631 A-TGGAAACGTGGATCGAAACATGGGCGTTCAGTGAAACAATTCACAGTCGCAGTTATAC 43689 | ||||||| ||| | ||||| |||||||| |||||| || ||| || ||||| Sbjct 8455 ACTGGAAACTTGGGTTGAAACGTGGGCGTTTTCTGAAACTATCCACTCACGTTCATATAC 8514 Query 43690 GCACATT 43696 |||||| Sbjct 8515 ACACATT 8521 Score = 125 bits (138), Expect = 8e-24 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 41759 GCGATCGTGAAGTATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGACATATTCGC 41818 || || ||||| ||| | ||||| ||||| ||||| || ||||| || || | ||||| Sbjct 6002 GCAATTGTGAAATATGTCTCACAGCGTGCAGGTATTGGGGTAAATGCAGGCCGCATTCGT 6061 Query 41819 GCGATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATCCCGTTCTGG 41878 || | || ||| |||||||||||||| | || || || || ||||||| Sbjct 6062 GCATTAGGCAGCCCAATTCGTGGTGGTGAAGCGTTCCACACTGGTTGTATTCCGTTCTAT 6121 Query 41879 AAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCA 41938 ||||| | || || ||||| ||||| ||||| |||||||| |||||||||||||||||| Sbjct 6122 AAACACTTCCAAACTGCGGTGAAATCTTGTTCGCAAGGTGGCGTTCGTGGTGGTGCTGCA 6181 Query 41939 ACGTTGT 41945 || |||| Sbjct 6182 ACCTTGT 6188 >seq216702 Length=10464 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 152721 ACTGAAAAAGATGTGT-ATGATGCGTTCCAGTCCTATGAGTATGAAGTAAACACCCTACA 152779 || || ||||| |||| |||| || || || || | ||||||||||| || || || || Sbjct 1777 ACCGATAAAGA-GTGTTATGACGCCTTTCAATCTTTAGAGTATGAAGTTAATACACTTCA 1719 Query 152780 TACTGCCAACGGACAAACCCCGTTTGTTACCATCACTTTCGGTACTGGTACGAGCGATTA 152839 ||||| || || |||||||| ||||||||| | ||| || ||| || | | Sbjct 1718 CACTGCGAATGGCCAAACCCCATTTGTTACCTTTGGTTTTGGCCTTGGAACCTCTAAAGA 1659 Query 152840 TGAACGCATGATCCAGAAAGCGATCCTGAAAAACCGTATTCGCGGCCTTGGTAAAGAGGG 152899 | ||| | || ||| || | || ||||||||||| ||| |||||||| ||| | | Sbjct 1658 AGCACGATTAATTCAGCAATCTATTCTGAAAAACCGCATTGCGGGCCTTGGCAAAAATCG 1599 Query 152900 TATTACTCCGGTATTCCCGAAACTGGT 152926 || || |||| ||||| || || || Sbjct 1598 TAAAACGGCGGTTTTCCCTAAGCTCGT 1572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561548872573920