Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq220453 158 9e-34 seq8809 131 1e-25 >seq220453 Length=1779 Score = 158 bits (174), Expect = 9e-34 Identities = 166/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| ||||| || ||||| ||||||||||||||||| | || ||||| | Sbjct 360 CGAAGTACCAAGTGAAGGGTTGATTCCTTTTGAATGTTATAATCGGAAAGAGTGCGTCCA 419 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | |||||||||||| | || | | ||||||||| || ||||| || || ||| Sbjct 420 TCTTCCAATTGTTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGAATTCCTTCCTTG 479 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| ||| || | ||| ||| | || | |||||| || | || ||||| | || || Sbjct 480 TCTTG-AATCTTAGCTTTAACATTCTCGATAGTGTCGGATGGCTCGACTTCCAATGTAAT 538 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| ||||||||||| ||||| || |||||||| Sbjct 539 AGTTTTTCCAGTTAAGGTCTTAACGAAGATCTGCAT 574 Score = 145 bits (160), Expect = 6e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || ||||| ||||| || || ||||| | | |||||| Sbjct 815 ACGTAGGACCAAGTGAAGAGTTGATTCCTTTTGGATATTGTAATCGGACAAGGTGCGTCC 874 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||||||||| | || | | ||||||||| || ||||| || || || Sbjct 875 ATCTTCCAATTGTTTGCCAGCGAAAATGAGACGTTGCTGATCTGGAGGAATTCCTTCCTT 934 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| || | ||| ||| | || | |||||| || | || ||||| | || | Sbjct 935 GTCTTG-AATCTTAGCTTTAACATTCTCGATAGTGTCGGATGGCTCGACTTCCAATGTAA 993 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||||||||| ||||| || |||||||| Sbjct 994 TAGTTTTTCCAGTTAAGGTCTTAACGAAGATCTGCAT 1030 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| | || |||||||| |||||||| ||||| | | ||| ||| Sbjct 1271 ACGGAGCACCAAATGCAAAGTTGATTCTTTCTGAATGTTGTAATCGGATAAGGTACGACC 1330 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||||| || || | || | | ||||||||| || || || || || || Sbjct 1331 ATCTTCCAACTGTTTTCCGGCGAAAATGAGACGTTGCTGATCTGGGGGGATTCCTTCCTT 1390 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||||| |||| | ||| || || | || ||||| | || || Sbjct 1391 GTCTTGGATTTTAGCCTTGACGTTTTCAATAGTATCGGAGGGCTCCACTTCCAATGTAAT 1450 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || | || ||||| || || ||||| Sbjct 1451 GGTCTTTCCGGTCAGAGTCTTAACGAAAATTTGCAT 1486 >seq8809 Length=5998 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 ||||| ||||| || || || ||||| | | ||||| ||| || | ||||||||| Sbjct 4527 GTGGACTCTTTCTGGATATTGTAATCGGACAGAGTGCGTCCATCTTCCAATTGTTTGCCG 4468 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 || | ||||| | |||||| || || ||||| |||||||||||||| | || |||| Sbjct 4467 GCGAAGATCAAACGTTGCTGGTCTGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTG 4408 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 ||| |||| | |||||| ||| | || || |||||||| || || ||||| || | ||| Sbjct 4407 ACATTTTCGATAGTGTCCGAAGGCTCGACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTC 4348 Query 29770 TTAACAAATATCTGCAT 29786 || || || |||||||| Sbjct 4347 TTTACGAAAATCTGCAT 4331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383720619786636