Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq216702 118 2e-21 seq21991 96.9 5e-15 >seq216702 Length=10464 Score = 118 bits (130), Expect = 2e-21 Identities = 242/355 (68%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 188158 CACAGATGCATGGAAAGAACTGACGGGCTACGGTTTCAGTCTGTACAGTACACCAAGTGA 188217 ||| |||| |||||||| | || ||||| ||||||||| | ||||| ||||||||||| Sbjct 806 CACCGATGAATGGAAAGCCCAAACAGGCTATGGTTTCAGTTTATACAGCACACCAAGTGA 747 Query 188218 ATCGCTGTGTGATCGTTTCTGTCGTCTCGACCAAGAGAAATACGGTGTCATTACAGGTAT 188277 | || ||||| || ||||| |||||||| | ||| ||||| || |||| | Sbjct 746 AAACCTATGTGACCGCTTCTGCCGTCTCGATACCGCTGAATTTGGTGTGATACAAGGTGT 687 Query 188278 CAATGACAAAGACTATTACACAAACTCGTTTCACTTAGACGTGTTCAAGAAA--GTTAAC 188335 | ||||||| || || |||||| || || |||| |||| || || || || Sbjct 686 TACCGACAAAGGTTACTATACAAACAGCTTCCATCTAGA--TGTTGAAAAACAGGTGAAT 629 Query 188336 CCATTTGAGAAAATTGATTTTGAAGCTGCATACCCAATTCATGCAAACGGTGGTTTCATC 188395 || | || ||||||||||||||||| | ||||| | || || || ||||| || Sbjct 628 CCTTACGATAAAATTGATTTTGAAGCGCCTTACCCTGCACTCGCGAATGGCGGTTTTATT 569 Query 188396 TGTTATGCTGAGTTCCCGAATATGCGAGATAACATCAAAGGTCTAGAGCGCGTATGGGAT 188455 ||||||| || | || || | | | |||| | | || |||| ||| ||||| Sbjct 568 TGTTATGGCGAATATCCAAACTTACAACATAATGTTAGAGCCTTAGAAGACGTGTGGGAC 509 Query 188456 TA-TGCTTACACTAAAGTAGCTTACTTCGGTACGAATACCCCGATTGATCAGTGT 188509 || ||| || | || |||| | ||||| || || || |||||| ||||| Sbjct 508 TACAGCTATCA-ACATGTGCCTTATTATGGTACTAACACACCCATTGATGAGTGT 455 Score = 87.8 bits (96), Expect = 3e-12 Identities = 164/237 (69%), Gaps = 7/237 (3%) Strand=Plus/Minus Query 187597 AGGCGACCCGTGCTACGCCATCAAAAAGTTAGCTCTTGAATGTGCAAGTAAGCGTATGTA 187656 ||| ||||| |||| ||| ||| | | ||| | || ||||| |||||||| ||||| Sbjct 1361 AGGTGACCCTAATTACGACATAAAACAACTCGCTTTAGAGTGTGCCAGTAAGCGCATGTA 1302 Query 187657 CCCAGACATTTTGAACTATGACAAACTAGTTGAAACGACTGGTGGGTTTAAGTCTCCAAT 187716 ||| || ||| | ||||| ||| | ||||| ||||| ||||| | || || Sbjct 1301 CCCCGATATTCTTAACTACGACCGTGTCGTTGATGTTACTGGATCATTTAAAACGCCGAT 1242 Query 187717 GGGCTGTCGCTCATTCTTGGGTGACTGGAAGAACGAAGATGGTGAAACGGTATTC--GAT 187774 |||||| ||| ||||||||| || || ||| |||| | ||| |||| ||| Sbjct 1241 GGGCTGCCGCAGTTTCTTGGGTATCTATGAG---GAAAATGG-GCAACAA-ATTCACGAT 1187 Query 187775 GGTCGTAATAACTTAGGCGTCGTCTCAATCAATATCCCGCGTATTGCTATTGAAGCA 187831 || || || || |||||||| | ||||| | || ||||||||||| |||||| Sbjct 1186 GGGCGCAACAATTTAGGCGTTATTAGCCTCAATTTGCCTCGTATTGCTATCGAAGCA 1130 >seq21991 Length=9696 Score = 96.9 bits (106), Expect = 5e-15 Identities = 122/164 (74%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 78791 AGCGTGCAGGTATCGGTGTTAACGGCGGTGCGATTCGTGCTGAAGGGGCAGTCG--TTCG 78848 ||||||||||||| || || || | || |||||||| ||| ||| | |||| Sbjct 6024 AGCGTGCAGGTATTGGGGTAAATGCAGGCCGCATTCGTGCATTAGG--CAGCCCAATTCG 6081 Query 78849 TTCAGGTGAGATTCGT--CACACTGGTGTAATTCCATTCTGGAAACACTTTCAAACTGCG 78906 | ||||| ||| ||||||||| ||||| |||| |||||||| ||||||||| Sbjct 6082 TGGTGGTGAAG--CGTTCCACACTGGTTGTATTCCGTTCTATAAACACTTCCAAACTGCG 6139 Query 78907 GTTAAATCGTGTTCTCAAGGTGGTGTACGTGGGGGTGCTGCGAC 78950 || ||||| ||||| |||||||| || ||||| |||||||| || Sbjct 6140 GTGAAATCTTGTTCGCAAGGTGGCGTTCGTGGTGGTGCTGCAAC 6183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787004113875840