Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq52980 223 1e-52
>seq52980
Length=40672
Score = 223 bits (246), Expect = 1e-52
Identities = 387/552 (70%), Gaps = 23/552 (4%)
Strand=Plus/Minus
Query 188647 ATTGGACAAGAAAAAGC--AAAACGTCAATTAGCTGTATCAGTTTATAATCATTATAAGC 188704
|| || ||||||||||| |||| || |||||||| | || ||||| ||||| ||||
Sbjct 22662 ATCGGTCAAGAAAAAGCGAAAAAAGTT--TTAGCTGTTGCGGTATATAACCATTACAAGC 22605
Query 188705 GCATTAATGCTCTTAATGaaaaatcaaaaaatga-tgatggagtaaagatcaaaaaaTCT 188763
|| ||| | ||||| | | |||| | |||||| || | | ||| |
Sbjct 22604 GC-TTA-----CGTAATGG----TGATAAAACCAGTGATGGTGTTGAATTAGGTAAAAGT 22555
Query 188764 AATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCT 188823
||| || | || |||| || || ||| ||||||||| | || ||| |||| || ||
Sbjct 22554 AATATTTTGCTAATTGGACCAACAGGTAGTGGTAAAACACTTTTAGCTGAAACTTTAGCG 22495
Query 188824 -GATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTA 188882
| ||| || ||||||| | | || |||||||||| | ||||| |||||||||||
Sbjct 22494 CGTTAT-TTGGATGTACCATTTACAATGGCTGATGCAACGACATTAACTGAAGCTGGTTA 22436
Query 188883 TGTAGGTGAAGATGTGGAAAACGTATTGCTTCGT---TTAATCCAAGCAGCTGATTACGA 188939
||| |||||||| || ||||| |||| ||| ||| | ||| | ||||||||
Sbjct 22435 TGTTGGTGAAGACGTTGAAAA--TATTA-TTCAAAAATTACTGCAAAAATGCGATTACGA 22379
Query 188940 TATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAA 188999
| | ||| ||| ||||||| || ||||| || |||||| | ||||||||| | | ||
Sbjct 22378 TGTTGAAAAAGCCCAACGTGGTATCGTATACATTGATGAAATTGATAAAATTTCACGTAA 22319
Query 189000 ATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATT 189059
|||||| | | |||| |||||||| || || || || ||||| || || ||||| | |
Sbjct 22318 ATCAGATAACCCATCAATTACCCGTGACGTTTCCGGTGAAGGTGTGCAACAAGCACTTCT 22259
Query 189060 AAAAATCATTGAAGGTACAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCA 189119
||| | |||||||| ||||||||| ||| || || ||||| || ||||||||||||||
Sbjct 22258 GAAACTAATTGAAGGAACAGTTGCGGCAGTACCACCACAAGGGGGACGTAAACACCCTCA 22199
Query 189120 CCAAGAAATGCTTGAAATAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGA 189179
||||| | | | | ||||| | || ||| | || ||| ||| || || ||||
Sbjct 22198 GCAAGAGTTTTTGCAGGTTGATACCTCAAAGATCCTCTTCATTTGTGGCGGGGCATTTGC 22139
Query 189180 TGGTCTTGAAAA 189191
|| || || ||
Sbjct 22138 AGGGCTCGATAA 22127
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1585399966027008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |