Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_027356.1 Length=108065 Score E Sequences producing significant alignments: (Bits) Value seq57119 118 7e-22 seq21034 82.4 5e-11 >seq57119 Length=3586 Score = 118 bits (130), Expect = 7e-22 Identities = 441/695 (63%), Gaps = 45/695 (6%) Strand=Plus/Minus Query 29942 TTACGCATGTCCATGATCATCTGGCCATCGTAACCAGTTCCCACAACTGTTTGCGGTACA 30001 |||||||| ||||| ||||| | |||||| || | | || || || | | || || Sbjct 2580 TTACGCATATCCATAATCATTTTGCCATCATAGTCTGCACCAACCACAATATTAGGCACC 2521 Query 30002 CCACCTTGATACTTCTGAGCACGAATCATTTCAACTTCTAGTTGTTTCCAACGAATCATC 30061 |||||| ||| || ||||| ||| ||||| |||| ||||||||| ||||| Sbjct 2520 TCACCTTTATATTTGTGAGCTTTAATTTGTTCAATCTCTAACTGTTTCCAATTGATCATT 2461 Query 30062 TCAGGAGTAATGGTACGTTGCAGAGCGGCGTTAGCCTCAGCTTCTTTCTTAGCTGCGTAC 30121 ||| | ||||| |||||||| | || ||||| ||||||||||||| || || ||| Sbjct 2460 TCACGGGTAATAGTACGTTGTAATATCGCATTAGCTTCAGCTTCTTTCTGTGCAGCATAC 2401 Query 30122 AGTTTAGCATC---------------------------------TGCATCACGTTCGTTT 30148 | ||| ||||| ||||| |||||| | Sbjct 2400 AATTTTGCATCCGCTTCTTGGCGCATCGCAAATGAACTTGCTTGTGCATTACGTTCTCTA 2341 Query 30149 GCAATAGCTTGGTTGTT-ACGAGCTTCACGATCTGCTTCTGCTTGTTTAACCTTCTGCTG 30207 || || |||| |||||| | || || | || ||||| || |||||| | ||| Sbjct 2340 GCGATGGCTT-GTTGTTCAGCAGACTCTCTTTCCGCTTCAGCAATAACAACCTTTTTCTG 2282 Query 30208 TGC---TTCTTGTTCAACACGAGCCAACTCAGCTTTCGCAGCATTAACTTGTTCTTCACG 30264 || ||| | || || ||| ||||| || |||| ||| |||| || Sbjct 2281 AGCTAATTCACGCTCTTTTTCTGC---CTCTGCTTTTGCTTGGTTAATTTGCTCTTGGCG 2225 Query 30265 AACTTTGGTATTCTGTACCTGTTCCATGATTACAGGCGGCAAAGTAATATCCTGAAGGAA 30324 | ||| ||||| || || || | || |||||||||||||| || | | Sbjct 2224 CATTTTAGTATTAACCACTTGCTCTTGTACAACTTCAGGCAAAGTAATATCTTGGATCAT 2165 Query 30325 CACTTGCTTAACTGTGTAACCATAAGGGCGTGCATACTCTTCAACTTCCTGTTGAATTGC 30384 | || || | ||| || ||||||||| ||||||| ||| || | | |||| | Sbjct 2164 AATTTCTTTTATTGTATAGCCATAAGGGGATGCATACCCTTGAATAGCATCACGAATAGA 2105 Query 30385 AGTTTGTAATTGAGCCTGAATTTTAGCATCAAACAAATCTTGTGCTTTAGGAACAGACTT 30444 |||||||| || | | || | | | |||||| || |||| |||| || Sbjct 2104 TTCTTGTAATTTTCTTTGTGTATCTGCTGTATAAAGATCTTGCGCATTAGCAACATCTTT 2045 Query 30445 GCCGAACTCACGAATAGTAGACAGTAATTTTTCAGTTACATATTTGTCTAACGCTTGATC 30504 || || || ||| || || | ||||||| ||||||||| ||||| |||| | Sbjct 2044 ACCAAATTCCAAAATCGTTGAAATCAATTTTTGGCGTACATATTTATCTAAAGCTTCACT 1985 Query 30505 CTGAGTACCTGCATTAATACGGTTAAT--CGGTGCCTTAGAACCATCAAATTGTAACATA 30562 | ||||| |||||||||| |||| ||| || |||||||||||||| || | ||| Sbjct 1984 TTCTGTACCACCATTAATACG--TAATACCGGAGCTTTAGAACCATCAAACTGAAGCATT 1927 Query 30563 ACAGTCAGGTCAACAGTGGATTTAAACTTATCCTG 30597 || || | |||||| | ||||| | ||||| || Sbjct 1926 ACCGTAATATCAACAATAGATTTTAGTTTATCTTG 1892 >seq21034 Length=11989 Score = 82.4 bits (90), Expect = 5e-11 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 24576 ATTACATCGC-CTGAGTAAATGTACGACTAATAACATCGTTCTGCTGTTCACGCGTCAGT 24634 ||||||| | ||| || || |||||| ||||||| || | ||| ||||| |||||| Sbjct 3725 ATTACATTGTACTG-GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGT 3667 Query 24635 GCGTTAAAACGTACAGCGTACCCTGAAACACGGATAGTTAATTG 24678 | ||| ||||||||||| || ||||| ||||||||||| | ||| Sbjct 3666 GAGTTGAAACGTACAGCATAACCTGATACACGGATAGTCAGTTG 3623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344338422783256