Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq21991 114 3e-20 >seq21991 Length=9696 Score = 114 bits (126), Expect = 3e-20 Identities = 376/582 (65%), Gaps = 18/582 (3%) Strand=Plus/Minus Query 259542 TGGGTAGTCTTGATAGTCTAATAGAGAATCAAGAGCACGAACAGA-AAGATCACATGCCG 259600 |||||| ||||| ||||| | || | ||||||||||||||||| || || | || Sbjct 6958 TGGGTAATCTTGGTAGTCAAGCAGTGCATCAAGAGCACGAACAGCTAATATTGCCAGCTC 6899 Query 259601 TTTCCATATCTTCTGGACGGTCAAAGTTACCCC--AGTTGATTGCACTCAATGTACATAA 259658 || || || ||| | | |||| | |||| |||| | ||| |||||||| | Sbjct 6898 TTCTAAT-TCATCTAGGCTATCAA--TCGCCCCTAAGTTAAATGCCGATAATGTACACAG 6842 Query 259659 ACTAATCAAACCTTCCCCAGTATTAATGTCATCAAATGGCACAGATGGTAGTGCGATTTC 259718 ||| ||| | | | |||||||| || |||||| || ||| ||||| ||||| Sbjct 6841 CGCAATTTCACCGTTCTCGTCATTAATGTTATTTAATGGCTTAGTTGGCAGTGCAATTTC 6782 Query 259719 TTGACACAAGTTGGATTGTTCAATAGGTGNNNNNNNNNNNNNNAATGTTGAATGAGTGTT 259778 | ||| ||||| || || || ||| | |||| ||| || || Sbjct 6781 TAAACATAAGTTTGACTGACGAACAGGGGCAACCTGTGGGTCAAATGGGCTATGTGTATT 6722 Query 259779 TGCATGGTCAATATTTTGAATATAGATACGCCCAGTTTCAGCACGCTC---AGTCATTAA 259835 ||||||| |||||||||||||| || ||||| ||||| || ||||||| Sbjct 6721 ACAGTGGTCAACGTTTTGAATATAGATTCGGCCAGTAGACGCACGTTCTTGCATCATTAA 6662 Query 259836 AGTACTGAATACTTCAACAGCAGGTAC---GGATTTTTTACGGATGCTTTGGTCAGCTTC 259892 | | |||| ||||| || || ||| ||| || || ||| || ||| Sbjct 6661 TGAA---AATAGCTCAACCGCTTTAACACTGGA---TTTGCGAATATTTTCATCTTGTTC 6608 Query 259893 GTATTTTTTATATAACTTTTCAAATTCTTTTTGATCAGAGCAGAATGCTTCATATAGCCC 259952 |||||| |||||| ||||||||| | |||||||| | | ||||| ||||| || || Sbjct 6607 GTATTTCACATATAAACGTTCAAATTCGTCTTGATCAGCGAAAAATGCATCATAAAGACC 6548 Query 259953 AGGGACTTCATTAGGACTAAAGAATGTAATATTCTTTCCATCAACCAAACGTTGATACAA 260012 || || || ||||| || |||||||||| | | || |||||| | ||||| Sbjct 6547 TGGAACGTCTGATGGACTGAATAATGTAATATCTTGGTTTTTAATCAAACGCTCATACAT 6488 Query 260013 AGTTTTGTTTACTTGGAAACAATAGTCCAGTTGACGCACACGGTTAAACTCAGTACCTTT 260072 ||||| | ||| | || || |||| || || ||||||||| ||| || Sbjct 6487 TAACTTGTTGAGTTGCACACCGTAATCCATATGGCGAACACGGTTACCTTCAACCCCACG 6428 Query 260073 GTTATTTTTAAGGACTACCAAGTTATCAAATTCCAAATGCCA 260114 |||||||| || || | || | |||| ||| | ||||| Sbjct 6427 ATTATTTTTCAGTACCAATAAACTTTCAACTTCAAGGTGCCA 6386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109275169205408