Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq105684 192 5e-44
seq12314 122 7e-23
seq160110 93.3 3e-14
>seq105684
Length=4320
Score = 192 bits (212), Expect = 5e-44
Identities = 389/572 (68%), Gaps = 4/572 (1%)
Strand=Plus/Plus
Query 40854 GATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCA 40913
||| | || ||||| ||||| || ||||||||||| ||||| | ||| ||| |||| ||
Sbjct 1666 GATCGTGAGGAAGGAGATCTAGGCCCTGTTTATGGGTTTCAATGGCGTCATATTGGTGCG 1725
Query 40914 AAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTT 40973
| ||| | || | || || || | ||||| |||||| | | ||
Sbjct 1726 GAGTATAAAACCTGCAAAGACGACTACACGGGCCAGGGAATTGATCAACTGAATGAGGTG 1785
Query 40974 ATAGATACGATTAAATCCGATCCCGATAG-CCGACGTATAATATTGTGCGCGTGGAACCC 41032
|| || || | || ||| ||| | | ||| ||||| || || ||| ||||| ||
Sbjct 1786 ATTACTA-GAATCAAGACGAACCCAAATGACCGGCGTATTATCATGACCGCCTGGAATCC 1844
Query 41033 AACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTC-AGTTTTACGTTT 41091
| ||| | | | |||||| | ||||| ||||||| || ||| |||| ||||||
Sbjct 1845 GATAGACATCCCTAAAATGGCACTTCCACCCTGTCATT-GTCTCGTCCAGTTCTACGTTG 1903
Query 41092 GCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCC 41151
||||| || || |||||||| |||||||||| || | || ||||| || || || |
Sbjct 1904 CGAATGGGGAGCTTTCATGTCAGATGTATCAAAGGTCGGCAGATATGGGGCTGGGAGTGC 1963
Query 41152 CGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAA 41211
| || || || ||||||||||| |||| || || |||||||| || |||||| || |
Sbjct 1964 CTTTCAATATCGCGAGTTATGCATTGCTGACTTACATGATTGCCCATGTTACCGGATTGA 2023
Query 41212 AACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGC 41271
||||||| || ||||||||||| | || || | ||| |||| | |||||| | ||||
Sbjct 2024 AACCTGGCGACTTTGTTCACACACTTGGCGACGCTCATGTTTATTTAAATCACGTTGAGC 2083
Query 41272 CGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCG 41331
|||||| ||| || || | | |||| | |||||||||| | ||||| |
Sbjct 2084 CGTTAAAAGAGCAGTTGCAAAGGGAACCACGCCCATTTCCAAAATTGTACATTAAGAGAA 2143
Query 41332 CTGTTGAAAACATTGATGATTTTTGCATCGATGATTTTGTCGTTTGCGATTACAATCCGT 41391
|| || || || |||||| | || ||||| | || || ||||||||
Sbjct 2144 AGGTAGAGCGAATCGAAGATTTTGTATTTGAGGATTTCGAAGTAAAGGACTACAATCCTC 2203
Query 41392 ACCCTAAAATCCACATGGACATGTCTGTATGA 41423
| ||||||||| ||||||| ||| | || |||
Sbjct 2204 ATCCTAAAATCAACATGGAAATGGCGGTGTGA 2235
>seq12314
Length=23998
Score = 122 bits (134), Expect = 7e-23
Identities = 187/267 (70%), Gaps = 6/267 (2%)
Strand=Plus/Plus
Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------CTGGT 19605
||||||||||| | |||||| | ||||| || || ||| ||||||| | |||
Sbjct 15165 CACATTATAATCTTCGATGAAATCGACGCTATTTGCAAGGCTAGAGGTTCAGTAGCAGGT 15224
Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665
| ||| |||||||| || ||||| |||||| | ||| ||||| | || |||||| |
Sbjct 15225 AATAGTGGTGTACATGATACAGTTGTAAATCAATTGCTGGCAAAAATCGATGGTGTTGAA 15284
Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCC 19725
||| |||| || || || |||||||| ||||| || |||| || | || || ||
Sbjct 15285 CAATTGAACAACATATTGGTTATTGGTATGACAAACAGACGTGATATGATTGATGAAGCT 15344
Query 19726 TTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGA 19785
||| | ||||| ||||| |||||| || | || |||||| | || ||||| | |||
Sbjct 15345 TTAATGCGACCGGGTCGATTGGAAGTACAAATGGAAATTGGTCTGCCAAATGAAGGGGGA 15404
Query 19786 CGTGTGGAAATTTTAAACATACATACA 19812
| | |||||||| || || |||
Sbjct 15405 AGACATCAGATTTTAAATATCCACACA 15431
>seq160110
Length=3910
Score = 93.3 bits (102), Expect = 3e-14
Identities = 126/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 43835 CATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAAT 43894
|||||| | ||| || || ||||| || || || |||||||| || || ||||||
Sbjct 2934 CATTTTGTTTCTCATGTATTAGCGTTCTTCGCAGCATCTGACGGGATTGTAAACGAAAAT 2875
Query 43895 TTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954
| || || || || || || ||| | | || ||||| || |||||||| |||
Sbjct 2874 CTTGTGGAACGATTCAGTCAGGAGGTGCAAGTCACTGAGGCACGTTGCTTTTATGGATTT 2815
Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTA 44010
|||||||| || ||||| | ||||| ||||||||||| || |||| ||||| ||
Sbjct 2814 CAAATTGCAATGGAAAACGTGCATTCCGAAATGTACAGCATTTTGATCGATACATA 2759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395909816171980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |