Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq105684 192 5e-44 seq12314 122 7e-23 seq160110 93.3 3e-14 >seq105684 Length=4320 Score = 192 bits (212), Expect = 5e-44 Identities = 389/572 (68%), Gaps = 4/572 (1%) Strand=Plus/Plus Query 40854 GATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCA 40913 ||| | || ||||| ||||| || ||||||||||| ||||| | ||| ||| |||| || Sbjct 1666 GATCGTGAGGAAGGAGATCTAGGCCCTGTTTATGGGTTTCAATGGCGTCATATTGGTGCG 1725 Query 40914 AAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTT 40973 | ||| | || | || || || | ||||| |||||| | | || Sbjct 1726 GAGTATAAAACCTGCAAAGACGACTACACGGGCCAGGGAATTGATCAACTGAATGAGGTG 1785 Query 40974 ATAGATACGATTAAATCCGATCCCGATAG-CCGACGTATAATATTGTGCGCGTGGAACCC 41032 || || || | || ||| ||| | | ||| ||||| || || ||| ||||| || Sbjct 1786 ATTACTA-GAATCAAGACGAACCCAAATGACCGGCGTATTATCATGACCGCCTGGAATCC 1844 Query 41033 AACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTC-AGTTTTACGTTT 41091 | ||| | | | |||||| | ||||| ||||||| || ||| |||| |||||| Sbjct 1845 GATAGACATCCCTAAAATGGCACTTCCACCCTGTCATT-GTCTCGTCCAGTTCTACGTTG 1903 Query 41092 GCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCC 41151 ||||| || || |||||||| |||||||||| || | || ||||| || || || | Sbjct 1904 CGAATGGGGAGCTTTCATGTCAGATGTATCAAAGGTCGGCAGATATGGGGCTGGGAGTGC 1963 Query 41152 CGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAA 41211 | || || || ||||||||||| |||| || || |||||||| || |||||| || | Sbjct 1964 CTTTCAATATCGCGAGTTATGCATTGCTGACTTACATGATTGCCCATGTTACCGGATTGA 2023 Query 41212 AACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACATAGAGC 41271 ||||||| || ||||||||||| | || || | ||| |||| | |||||| | |||| Sbjct 2024 AACCTGGCGACTTTGTTCACACACTTGGCGACGCTCATGTTTATTTAAATCACGTTGAGC 2083 Query 41272 CGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAAACGCG 41331 |||||| ||| || || | | |||| | |||||||||| | ||||| | Sbjct 2084 CGTTAAAAGAGCAGTTGCAAAGGGAACCACGCCCATTTCCAAAATTGTACATTAAGAGAA 2143 Query 41332 CTGTTGAAAACATTGATGATTTTTGCATCGATGATTTTGTCGTTTGCGATTACAATCCGT 41391 || || || || |||||| | || ||||| | || || |||||||| Sbjct 2144 AGGTAGAGCGAATCGAAGATTTTGTATTTGAGGATTTCGAAGTAAAGGACTACAATCCTC 2203 Query 41392 ACCCTAAAATCCACATGGACATGTCTGTATGA 41423 | ||||||||| ||||||| ||| | || ||| Sbjct 2204 ATCCTAAAATCAACATGGAAATGGCGGTGTGA 2235 >seq12314 Length=23998 Score = 122 bits (134), Expect = 7e-23 Identities = 187/267 (70%), Gaps = 6/267 (2%) Strand=Plus/Plus Query 19552 CACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------CTGGT 19605 ||||||||||| | |||||| | ||||| || || ||| ||||||| | ||| Sbjct 15165 CACATTATAATCTTCGATGAAATCGACGCTATTTGCAAGGCTAGAGGTTCAGTAGCAGGT 15224 Query 19606 GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAAC 19665 | ||| |||||||| || ||||| |||||| | ||| ||||| | || |||||| | Sbjct 15225 AATAGTGGTGTACATGATACAGTTGTAAATCAATTGCTGGCAAAAATCGATGGTGTTGAA 15284 Query 19666 CAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCC 19725 ||| |||| || || || |||||||| ||||| || |||| || | || || || Sbjct 15285 CAATTGAACAACATATTGGTTATTGGTATGACAAACAGACGTGATATGATTGATGAAGCT 15344 Query 19726 TTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGA 19785 ||| | ||||| ||||| |||||| || | || |||||| | || ||||| | ||| Sbjct 15345 TTAATGCGACCGGGTCGATTGGAAGTACAAATGGAAATTGGTCTGCCAAATGAAGGGGGA 15404 Query 19786 CGTGTGGAAATTTTAAACATACATACA 19812 | | |||||||| || || ||| Sbjct 15405 AGACATCAGATTTTAAATATCCACACA 15431 >seq160110 Length=3910 Score = 93.3 bits (102), Expect = 3e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 43835 CATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAAT 43894 |||||| | ||| || || ||||| || || || |||||||| || || |||||| Sbjct 2934 CATTTTGTTTCTCATGTATTAGCGTTCTTCGCAGCATCTGACGGGATTGTAAACGAAAAT 2875 Query 43895 TTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTT 43954 | || || || || || || ||| | | || ||||| || |||||||| ||| Sbjct 2874 CTTGTGGAACGATTCAGTCAGGAGGTGCAAGTCACTGAGGCACGTTGCTTTTATGGATTT 2815 Query 43955 CAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTA 44010 |||||||| || ||||| | ||||| ||||||||||| || |||| ||||| || Sbjct 2814 CAAATTGCAATGGAAAACGTGCATTCCGAAATGTACAGCATTTTGATCGATACATA 2759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395909816171980