Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq145796 145 1e-29 seq3060 141 1e-28 seq311087 136 5e-27 seq319189 98.7 1e-15 >seq145796 Length=3384 Score = 145 bits (160), Expect = 1e-29 Identities = 634/990 (64%), Gaps = 21/990 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | ||||| || || || ||||||| ||||||| || |||||||| || Sbjct 1347 GTAAATGTTGGAAGTGTACGGCTCGAATGATTCATTGTTACCCAGAATCTGTGCGGTTGA 1288 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 ||||| ||||| || || | | ||| || |||| || | | ||| || || Sbjct 1287 TGCTGTAGGCATAGGAGCAACTAGTAGAGAATTTCGAATTCCGTGGTTCTTTATCTTCTC 1228 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAAACTGAA 110885 || | ||| |||||| | || || | | || |||||||| ||| |||| | Sbjct 1227 TTTCAATACACTCCAGTCCCAAA-GATCTGTCGGTTTTTTATCCCACATATCATACTGCA 1169 Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945 | ||| | | | || || || ||| | ||||| || | |||| |||||| | Sbjct 1168 AAATCCCCTTACTCACAGGCGATCCTTCATATGTTTCGTATGGTCCTTCTTTTTCAGCTA 1109 Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC- 111004 |||||| || | ||||| | ||| ||| || ||||| || || | ||| | Sbjct 1108 TTTCACAACTGGATTCCAGTGCCCCGTAATAGATCGTTTCGAAAATCTGTTGATTAAGAA 1049 Query 111005 -TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 || | |||||||| ||| | | || || ||||||| || |||| || || || Sbjct 1048 GTCGT--GCTTCATCGCTTTCATAGGGATATCGCAACAAAATGAAGGCATCAGCAAGTCC 991 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGAC--TTTCGCGCAGTCTCAACG 111121 || || || | ||| || || | ||||| |||||||||| ||| || ||| | | Sbjct 990 CTGCACTCCAATACCGATCGGCCGGTGTCTCATATTAGACACTTTTGCT---TCTGGAAG 934 Query 111122 -GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 || || ||| || |||| || | |||| | || |||||||| |||| ||| Sbjct 933 TGGGTAGTGATTAACATCTATGATCTTATTCAAATTTCTTGTTACAATCTTGGTGACTTC 874 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 111240 | ||||||| ||||| | || | | || ||||| ||| |||| | || || Sbjct 873 CTTCAGTTTTTTGAAATCATAGGTCCTA---TCATCATTCACAAACTTATTCAACGCAAT 817 Query 111241 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 111300 || || | ||| ||||| || |||| ||||| || ||||||| |||||||| || Sbjct 816 AGAAGCAAGATTACAAACTGCAATCTCGTCCTTCGATGAATACTCTACTATTTCTGTGCA 757 Query 111301 TAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATC 111360 | || | | ||| || |||| ||| | ||| ||||| || ||||| ||||| Sbjct 756 CAGATTACTGCAGTGAATGGTACCCAGATTTTGTTGATTACTTTTTCGATTGCAAGCATC 697 Query 111361 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA- 111419 |||||| | |||||| || || || || || || |||| | || || ||| | Sbjct 696 CTTGTATAACATGTACGGAGTACCGGTTTCTACTTGAGATTCAATGATTGCAAACCATAG 637 Query 111420 -CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 || | ||| ||| | || || || || || |||||| || ||| | Sbjct 636 GGATTG--CGCTTTGACAGTTCGCTTCGCACGACCTTCTTTCTCGTATTTCTCGTACAAT 579 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 ||||| || || || ||| | ||| | | || || || | |||||| | | | Sbjct 578 GCTTCGAATTCTTCGCCCCAAGTGTCAAATAATCCCGGACACTGATGTGGACACATTAAA 519 Query 111539 GACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 111598 ||||| | ||| | || || || |||||||| | || |||||||||| | || Sbjct 518 GACCAATCTCCATTGGCTTCCACGCGTTTCATGAATAAATCAGGAATCCACAATGCATAA 459 Query 111599 AAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 111657 || | ||||||| | | | | |||||| | || || | ||| || | ||| || Sbjct 458 AATAAATCTCTAGCTCTGTG-CTCTTCTTTTCCAGTATTCTTTTTTAAATCCAAGAATTC 400 Query 111658 CATGATATCCGCGTGCCATGGCTCAAGATA 111687 | ||||| ||||||||||| || ||||| Sbjct 399 AAAAATATCAGCGTGCCATGGTTCTAGATA 370 >seq3060 Length=6342 Score = 141 bits (156), Expect = 1e-28 Identities = 510/788 (65%), Gaps = 16/788 (2%) Strand=Plus/Plus Query 110611 ATCCTTCATATCCTTGGACCAGAGAC-CAATCTTCTTGAGGTCATTGACGAGGTGCTTGT 110669 || ||||||||||| ||| | | ||| || || ||||| || | |||||| | | Sbjct 2562 ATTCTTCATATCCTCATTCCATAAATTCAAATTTATT-AGGTCCTTTAGGAGGTGATGAT 2620 Query 110670 TGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTT 110729 | |||| |||||| |||| | | ||||| |||||| || | |||||||||| Sbjct 2621 TAACAACTTGAAACTCTCCTGACAACACACGTCTCATGTAGATATTAGAAGTGTATGGTT 2680 Query 110730 CAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCA 110789 | || |||||||||| || | ||||| || || | ||||||||||| ||||| | || Sbjct 2681 CGAAAGATTCATTATTTCCGAGAATTTGGGCAGTAGCTGCTGTTGGCATAGGTGCTAACA 2740 Query 110790 --AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG-- 110845 ||||| | | | | || | | |||| || || || | |||| || Sbjct 2741 GTAAAGAATTTCTC--ACCCCGTGTTTACTGATCTTCTCTTTCAGCGCTGCCCAATCCCA 2798 Query 110846 TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGA 110905 || || | | |||||| |||| |||| ||| | || || | |||| | | ||| Sbjct 2799 TAATTCTG-TGGGTTTCTTTTTCC-ACATATCATATTGCAGAATCCCTCTACTCACAGGA 2856 Query 110906 GAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 110965 || || || | |||||||| | ||| | ||||| | |||||| || || |||| Sbjct 2857 GATCCTTCGTACGTTTCATAAGGACCCAGTTTCTCAGCTATTTCACAACTTGCTTCCAAA 2916 Query 110966 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 111025 | ||| ||| || ||||| ||||| | ||||| | ||| ||||| || || Sbjct 2917 GCCCCGTAATAAATAGTTTCGAAGATTTGTTGATTCAACAGCTTTGCTTCTGAAGATTCG 2976 Query 111026 AATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 111085 | | || || | ||| ||| |||| || | ||| || || || | || || ||| Sbjct 2977 TAAGGATATCGCATGAGAATGAATGCATCTGCCATACCCTGGACCCCTATGCCTATTGGT 3036 Query 111086 CTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTCAATG 111142 | ||||| | ||| || ||| || | || || ||| ||| | || |||||||| Sbjct 3037 CGATGTCGAAGATTTGATCTTCTCG---TTTCGGAAAGGGGGTAATAGTTAATGTCAATG 3093 Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 111202 | || || | ||| || || || | ||||| | ||| | || |||||| |||| | Sbjct 3094 ATACGATTCAAATTCTTCGTTACTACTTTTGTAACTTCTTTGAGCTTTTCAAAATCGTAG 3153 Query 111203 GTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCC 111262 || | | | ||| ||| |||| || |||| || || ||||||||||| || Sbjct 3154 GTCTTATTTTTCACATCGACGAACTTATTCAGAGCGAGAGAAGCTAAATTGCAAACGGCT 3213 Query 111263 GTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTC 111322 |||||| | | ||||| | ||||| || ||||| ||| | ||| || Sbjct 3214 ACCTCATCTGGCGCCGAATACTCCACGATTTCCGTGCATAAATTGCTGCATCGAATAGTT 3273 Query 111323 CCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTC 111382 || | || | || ||||| || ||||| ||||||||||||||||| || || || Sbjct 3274 CCAAGGTTTTGCTGATTACTTTTTCGATTGCAAGCATCCTTGTAGAGCATATATGGTGTG 3333 Query 111383 CCCGTCTC 111390 || || || Sbjct 3334 CCTGTTTC 3341 >seq311087 Length=3001 Score = 136 bits (150), Expect = 5e-27 Identities = 196/271 (72%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 9281 CAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGA 9340 || ||| ||||| ||| | ||| ||||||| ||| || ||||||||||| ||||| Sbjct 575 CATAAACTACCGTGAGGCGTACAACATGTTTGCTTGCAATGGTATCCTCTTCAATCATGA 634 Query 9341 ATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CGAGG-GTATCAAACAA 9398 |||||| ||||||| | | | ||||| || |||||||| ||| || | || | Sbjct 635 ATCACCCCGACGAGGCGAAAATTTTGTCACACGCAAGATTACACGATCAGTGGCCAA--A 692 Query 9399 ATCATGAAG--GGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATT 9456 ||| ||| || || |||| | | || ||||| ||| | || | | |||| Sbjct 693 ATC--GAACTAGGCCAACTTGAGTGCTTCGAGTTGGGCAACTTGTCTTCGAAACGTGATT 750 Query 9457 GGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 9516 |||||||||| ||||||||||||||||| |||||||| ||||||||||| || || ||| Sbjct 751 GGGGTCACGCAAAGGACTATGTTGAAGCGATGTGGCTGATGCTTCAACAGGATAAACCCG 810 Query 9517 ACGAATATGTAGTAGCAACGGGTGAGACCCA 9547 | || | ||| ||||||| ||||| || || Sbjct 811 AAGACTTTGTTATAGCAACTGGTGAAACTCA 841 >seq319189 Length=4870 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 181826 CGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTTGTTTGAACCTGTATAGTCGTT 181885 ||| || || ||||||| ||||| || | || ||||| || | ||| | ||| | Sbjct 1173 CGTGCCGAACTGACCACGCGGCTCCAGCAAATTTATGTTATTCGCGCCTACAAAGTTCTG 1232 Query 181886 GGCCAACTTAACGATGGTATCCGCA-AGGGACACTTCACCGTGGTGGTAAGCTGACTTGT 181944 |||||| || || ||||| | ||| || |||||||||||||| ||||| || ||| | | Sbjct 1233 GGCCAAGTTGACAATGGTCGC-GCACAGTGACACTTCACCGTGATGGTATGCCGACATCT 1291 Query 181945 CCGCAACATATGCCGCCAACTGTGCCACCTTCATTTCATCTTTGAGGTTCTTGTGGAAGC 182004 | || || | | ||||||||||| ||||||| ||| |||| ||| | ||||| Sbjct 1292 CGGCTACGGAACCTGCCAACTGTGCGACCTTCACTTCCCGTTTGTCGTTACGTTTGAAGC 1351 Query 182005 AAGCATACATCACTTTCCTCTGCGAAGGCTTGAGACCATCCGCCAT 182050 | | |||| ||||| | || ||||||| |||||| |||| Sbjct 1352 AGGTGAACATGACTTTACGTTGACCTGGCTTGAAACCATCTACCAT 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625526183721600