Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq145796 123 3e-23 seq319189 87.8 2e-12 >seq145796 Length=3384 Score = 123 bits (136), Expect = 3e-23 Identities = 559/875 (64%), Gaps = 21/875 (2%) Strand=Plus/Minus Query 117999 ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGG 118058 ||||||||||||||| |||| |||| ||| || | ||| ||| | | ||||||||| Sbjct 1529 ATTTCCCACACAGTCTTGTATAGGTCGCGAATTTCCTTTGGTATACGCTCAATATTTTGG 1470 Query 118059 ATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGA--CCAGAGACCAATCT 118116 || ||||||| | | || || ||||||| ||| | ||| | | | | || Sbjct 1469 ATAGATCCACGGTTCGCAATTATCTCATGTTTCATAT--TTTCATCCCACAAATCCAACT 1412 Query 118117 TTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC 118176 | | | ||| | | ||||| | |||||||| || || || | || || | Sbjct 1411 CTGTTAAATCTTTGAGAAGATGATGGTTGACAACTTGGAATTCTCCAGATAGTACTCGCC 1352 Query 118177 TCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTG 118236 | || || |||| ||||| ||||| || | ||||||||||||| || || || | Sbjct 1351 TGTTGTAAATGTTGGAAGTGTACGGCTCGAATGATTCATTGTTACCCAGAATCTGTGCGG 1292 Query 118237 TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGC 118296 | || ||||| ||||| || || | || || || || | || | | | | || Sbjct 1291 TTGATGCTGTAGGCATAGGAGCAACTAGTAGAGAATTTCGAATTCCGTGGTTCTTTATCT 1232 Query 118297 GTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTC---TCCCCCTGCCACATATCAA 118353 || || | | |||||| | || | |||| | | |||||||||| Sbjct 1231 TCTCTTTCAATACACTCCAGTCCCAA---AGATCTGTCGGTTTTTTATCCCACATATCAT 1175 Query 118354 ACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCT 118413 |||| | || || | | | |||||||| ||| |||| || ||||| || || | Sbjct 1174 ACTGCAAAATCCCCTTACTCACAGGCGATCCTTCATATGTTTCGTATGGTCCTTCTTTTT 1115 Query 118414 CCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCAT 118473 | || | ||| | || | || || || ||| ||| || ||||| ||||| | || Sbjct 1114 CAGCTATTTCACAACTGGATTCCAGTGCCCCGTAATAGATCGTTTCGAAAATCTGTTGAT 1055 Query 118474 TCATT-GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCG 118532 | | | | || | || ||| ||| | | ||| ||||||| || |||| || Sbjct 1054 TAAGAAGTCGTG-CTTCATCGCTTTCATAGGGATATCGCAACAAAATGAAGGCATCAGCA 996 Query 118533 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC 118592 || || || || || | || || || || ||||||||||||||| || ||| Sbjct 995 AGTCCCTGCACTCCAATACCGATCGGCCGGTGTCTCATATTAGACACTTTTGCT-TCTGG 937 Query 118593 ACG-GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGAT 118651 | | || || ||| ||| || | | |||| | |||| | || |||| ||| |||| Sbjct 936 AAGTGGGTAGTGATTAACATCTATGATCTTATTCAAATTTCTTGTTACAATCTTGGTGAC 877 Query 118652 TTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGC 118711 ||| | || |||| | ||||| | | | | || ||||| ||| ||||| | || Sbjct 876 TTCCTTCAGTTTTTTGAAATCATAGGTCCTA---TCATCATTCACAAACTTATTCAACGC 820 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 || || || |||||||| || | |||| ||||| | ||||||| ||||| || Sbjct 819 AATAGAAGCAAGATTACAAACTGCAATCTCGTCCTTCGATGAATACTCTACTATTTCTGT 760 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG--TTACAC 118829 ||||| || | | |||||| |||| || | |||||| ||||| | || || Sbjct 759 GCACAGATTACTGCAGTGAATGGTACCCAGATTTTGTTGATT--ACTTTTTCGATTGCAA 702 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 118864 ||||||||||| | |||||| || || || || || Sbjct 701 GCATCCTTGTATAACATGTACGGAGTACCGGTTTC 667 >seq319189 Length=4870 Score = 87.8 bits (96), Expect = 2e-12 Identities = 166/243 (68%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 179085 CGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATT 179144 ||| || || ||||||| ||||| || | ||| || || || | || | ||| | Sbjct 1173 CGTGCCGAACTGACCACGCGGCTCCAGCAAATTTATGTTATTCGCGCCTACAAAGTTCTG 1232 Query 179145 GGCCAACTTGACAATCGTATCCGCG---AGGGAGACTTCACCGTGATGGTAAGCCGACTT 179201 |||||| |||||||| || |||| || || ||||||||||||||||| |||||| | Sbjct 1233 GGCCAAGTTGACAATGGT---CGCGCACAGTGACACTTCACCGTGATGGTATGCCGACAT 1289 Query 179202 GTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAA 179261 || || || | | |||||||| || ||||||| || ||| ||| | ||| Sbjct 1290 CTCGGCTACGGAACCTGCCAACTGTGCGACCTTCACTTCCCGTTTGTCGTTACGTTTGAA 1349 Query 179262 GCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGA 179321 ||| | |||| || || | ||| ||||||| || || ||||| || ||| || Sbjct 1350 GCAGGTGAACATGACTTTACGTTGACCTGGCTTGAAACCATCTACCATGGACGGGATCGA 1409 Query 179322 ACG 179324 ||| Sbjct 1410 ACG 1412 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 179955 CTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAAC 180014 ||| ||||| || |||||||| ||||||||||| ||||||||||| || || | || Sbjct 2082 CTTACCACGCAGTGGGAACACTCCGTAGTGATCGCGACCAACCACTCCCAGCCCGGACAC 2141 Query 180015 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGC 180074 || | | ||| || ||||| ||||| |||| ||| ||||| ||| |||| | Sbjct 2142 CGCCAACGACTTGGCTGAATCTCCCTCAGTCAAGATTAGCGTGCACAAATGTGATTCTCT 2201 Query 180075 CGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACC 180113 | || |||| ||| || || |||| |||||| || || Sbjct 2202 GCTTCCCGCCTCGTTGGCATCCTCCAGCTTGGGTATTCC 2240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615967674473760