Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq311087 140 4e-28 seq3060 116 4e-21 seq80416 89.7 6e-13 seq319189 84.2 3e-11 >seq311087 Length=3001 Score = 140 bits (154), Expect = 4e-28 Identities = 197/271 (73%), Gaps = 8/271 (3%) Strand=Plus/Plus Query 7357 CAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAACCATGA 7416 || ||| ||||| ||| | ||| ||||||| ||| || ||||||||||| ||||| Sbjct 575 CATAAACTACCGTGAGGCGTACAACATGTTTGCTTGCAATGGTATCCTCTTCAATCATGA 634 Query 7417 ATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTAC-CGAGG-GTATCAAACAA 7474 |||||| ||||||| | | | ||||||||| |||||||| ||| || | || | Sbjct 635 ATCACCCCGACGAGGCGAAAATTTTGTCACACGCAAGATTACACGATCAGTGGCCAA--A 692 Query 7475 ATCATGAAG--GGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGCGAGAGATT 7532 ||| ||| || || |||| | | || ||||| ||| | || | |||| Sbjct 693 ATC--GAACTAGGCCAACTTGAGTGCTTCGAGTTGGGCAACTTGTCTTCGAAACGTGATT 750 Query 7533 GGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 7592 |||||||||| ||||||||||||||||| |||||||| ||||||||||| || || ||| Sbjct 751 GGGGTCACGCAAAGGACTATGTTGAAGCGATGTGGCTGATGCTTCAACAGGATAAACCCG 810 Query 7593 ACGAATATGTAGTAGCAACGGGTGAGACCCA 7623 | || | ||| ||||||| ||||| || || Sbjct 811 AAGACTTTGTTATAGCAACTGGTGAAACTCA 841 >seq3060 Length=6342 Score = 116 bits (128), Expect = 4e-21 Identities = 602/947 (64%), Gaps = 20/947 (2%) Strand=Plus/Minus Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963 || ||||| || || || |||||||| ||||| ||||| || || || || | ||| | Sbjct 3352 AGGCTCAAGTAGAAACAGGCACACCATATATGCTCTACAAGGATGCTTGCAATCGAAAAA 3293 Query 104964 GTAATCAAAAGAAT-TTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAA 105022 ||||||| | || |||| | || | | |||| | || || |||||| |||| Sbjct 3292 GTAATCAGCAAAACCTTGGAACTATTCGAT-GCAGCAATTTATGCACGGAAATCGTGGAG 3234 Query 105023 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 105082 | | | | ||||||| || || || || | || || ||||||| |||| Sbjct 3233 TATTCGGCGCCAGATGAGGTAGCCGTTTGCAATTTAGCTTCTCTCGCTCTGAATAAGTTC 3174 Query 105083 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142 || ||| | | ||||| | |||| |||||| ||| | |||||||| ||| || Sbjct 3173 GTCGATGTGAAAAATAAGACCTACGATTTTGAAAAGCTCAAAGAAGTTACAAAAGTAGTA 3114 Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGT 105199 || || || | || | | ||||| | || | ||||||| || || || | Sbjct 3113 ACGAAGAATTTGAATCGTATCATTGACATTAACTATTACCCCCTTTCCGAAACGA---GA 3057 Query 105200 AAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTC 105259 | ||| ||| | |||| || ||||| || | || || |||||| | || |||| |||| Sbjct 3056 AGATCAAATCTTCGACATCGACCAATAGGCATAGGGGTCCAGGGTATGGCAGATGCATTC 2997 Query 105260 ATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 ||||| || | | | || || ||||| ||| | ||| | || || Sbjct 2996 ATTCTCATGCGATATCCTTACGAATCTTCAGAAGCAAAGCTGTTGAATCAACAAATCTTC 2937 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCA 105379 || || || ||| ||| ||| | || || |||| || | || ||| ||||| Sbjct 2936 GAAACTATTTATTACGGGGCTTTGGAAGCAAGTTGTGAAATAGCTGAGAAACTGGGTCCT 2877 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 105439 |||||||| | || || ||||| | |||| | || |||| |||||||||| || Sbjct 2876 TATGAAACGTACGAAGGATCTCCTGTGAGTAGAGGGATTCTGCAATATGATATGTGGAAA 2817 Query 105440 GGTGAGACCA-AGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGG 105498 | ||| || | | | || |||| ||| || || || |||| | | || Sbjct 2816 AAGAAACCCACAGAATTA-TGGGATTGGGCAGCGCTGAAAGAGAAGATCAGTAAACACGG 2758 Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | | || | | || | || || ||||||||||| | || || ||||| | || Sbjct 2757 GGTGAGAAATTCTTTACTGTTAGCACCTATGCCAACAGCAGCTACTGCCCAAATTCTCGG 2698 Query 105559 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGG 105618 |||||||||| || ||||| ||||| | || ||||| ||||| | | | || Sbjct 2697 AAATAATGAATCTTTCGAACCATACACTTCTAATATCTACATGAGACGTGTGTTGTCAGG 2638 Query 105619 AGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGG--TCTCTGG 105676 ||||||| |||| || | || ||| | | ||||| || | ||| | | | ||| Sbjct 2637 AGAGTTTCAAGTTGTTAATCATCACCTCCTAAAGGACCT--AATAAATTTGAATTTATGG 2580 Query 105677 TCCAAGGATATGAAGGATCTCAT-GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGA 105735 ||||||||||| || | || || || | | |||||||||||||| |||| | Sbjct 2579 AATGAGGATATGAAGAATGTAATAATTGCAAAC-CGCGGTTCCATTCAAAAAATTGAGCG 2521 Query 105736 TATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGAT 105793 ||||| || || || | || ||| || |||||||||| ||| ||| | Sbjct 2520 CATTCCGAAAGATATACGTGATTTATACAAAACTGTTTGGGAAATTTCAGTGCGAACCA- 2462 Query 105794 GTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCA 105840 ||| | ||||| ||||| ||||| || ||||||||||| || Sbjct 2461 -CAATTCAAATGGCGGCAGACCGTGGAGCTTTTATTGATCAAAGCCA 2416 >seq80416 Length=25762 Score = 89.7 bits (98), Expect = 6e-13 Identities = 196/288 (68%), Gaps = 12/288 (4%) Strand=Plus/Plus Query 9578 GTCGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAA 9634 || || ||||| |||| |||||| |||||| |||||||| ||||| || | Sbjct 24070 GTTGCTGCGATAACAATAATACCC---TCATTACCTTCAAAACCGTCCATTTCAACTAGC 24126 Query 9635 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 9694 | |||||| | ||||| || || ||||| | | | |||||||| ||||| Sbjct 24127 ATTTGGTTCAGTGTTTGCTCACGCTCATCGTGACCACCACCAAGACCAGCACCACGTTGA 24186 Query 9695 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG--GTTGATTTTCGCGAGCGA 9752 || || || ||||||||||| || |||| ||| || | | || |||| | || Sbjct 24187 CGACCTACTGCGTCAATCTCATCGATAAAGATGATACAAGGCGCTGCTTTTTTC--GCTT 24244 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 ||| || | ||| || ||||| || |||||||| |||||||| ||||| |||| || Sbjct 24245 GTTCGAACATATCACGAACACGAGAAGCCCCCACACCCACAAACATTTCCACGAAGTCTG 24304 Query 9813 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCT 9859 ||||| || | || ||| ||||| || | ||||| || || ||| Sbjct 24305 AACCGGAA-ATAGTGAAGAATGGGACTTTTGCCTCACCAGCGATAGCT 24351 >seq319189 Length=4870 Score = 84.2 bits (92), Expect = 3e-11 Identities = 165/243 (68%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 168478 CGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATT 168537 ||| || |||||||||| |||||| || | ||| || || || | || | ||| | Sbjct 1173 CGTGCCGAACTGACCACGCGGCTCCAGCAAATTTATGTTATTCGCGCCTACAAAGTTCTG 1232 Query 168538 CGCCAACTTGACAATCGTGTCCGCG---AGAGAGACTTCACCGTGGTGGTACGCACTCTT 168594 ||||| |||||||| || |||| || || ||||||||||| ||||| || | | Sbjct 1233 GGCCAAGTTGACAATGGT---CGCGCACAGTGACACTTCACCGTGATGGTATGCCGACAT 1289 Query 168595 CTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAA 168654 ||| || || | | |||||||| || || |||| || ||| || | ||| Sbjct 1290 CTCGGCTACGGAACCTGCCAACTGTGCGACCTTCACTTCCCGTTTGTCGTTACGTTTGAA 1349 Query 168655 GCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATGTGTGCGATAGA 168714 ||| | | |||| || || ||||| ||||||| |||||| ||||| | ||| || Sbjct 1350 GCAGGTGAACATGACTTTACGTTGACCTGGCTTGAAACCATCTACCATGGACGGGATCGA 1409 Query 168715 ACG 168717 ||| Sbjct 1410 ACG 1412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580933618571040