Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028743.1 Length=48594 Score E Sequences producing significant alignments: (Bits) Value seq182390 183 9e-42 >seq182390 Length=24147 Score = 183 bits (202), Expect = 9e-42 Identities = 346/505 (69%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 668 GGCGTTATTCTTTGCGGTCGTGAGTTTATGAACTCATTGGAAGAAAGCTCTCTTGAAGAA 727 || || || ||||||| ||||||||| |||||||| | |||||| || | || ||| Sbjct 13380 GGGGTGATACTTTGCGCTCGTGAGTTCATGAACTCCCTTGAAGAATCATCGATGGAGGAA 13321 Query 728 GTTAAACAGGCGATCAAGTCTGAGCCTTTTTTAGCAAAtttttttGATGTCGGCGAGAAG 787 || ||||| ||||| | | | | || | |||||| ||||||| | ||||| ||| Sbjct 13320 GTCAAACAAGCGATAAGGGCGGTTCCCTGGTTAGCAGCCCATTTTGATATTGGCGAAAAG 13261 Query 788 TATGTTCGCACTAAAGATGGGCGGATTTCTTATGTGTTTTCCGGACTTCGGCATAACTTA 847 || || | || ||| | || |||||| || | ||| || || || || || Sbjct 13260 TACATTAGAACCGTTGATCGAAAAGTTAGTTATGTTTTCTGCGGGCTACGCCACAATTTG 13201 Query 848 GATAGCATCAAATCTAAAGCCCGTATTTTGATTGCGTGGATAGATGAAGCAGAAACAGTA 907 || || || |||||||| || | ||| | || ||| | |||||||| ||||| || Sbjct 13200 GACAGTATAAAATCTAAGGCAAGAATTCTACTTTGCTGGGTTGATGAAGCCGAAACTGTT 13141 Query 908 AGCGAAACTGCTTGGCGGAAATTAATTCCAACCGTGCGTGAGAATAATTCCGAAATATGG 967 || ||||| || |||| ||| | ||| || || ||||| | || || ||||||||| Sbjct 13140 AGTGAAACAGCATGGCAAAAACTGGATCCGACGGTACGTGAAGACAACTCGGAAATATGG 13081 Query 968 GTAACTTGGAACCCGGAAAATAGA-GGGAGCGCAACAGATACTCGCTTCAGGCAAAATCC 1026 ||||| |||||||| ||||| ||| || || || || |||| || || || | ||| | Sbjct 13080 GTAACGTGGAACCCTGAAAA-AGATGGTAGTGCTACGGATAAACGGTTTAGAAAGAATGC 13022 Query 1027 ACCTGAAAACAGCTGCATAA---TTGAAATGAGCTACCAAGATAATCCTTGGTTTCCTGA 1083 ||| | |||||| | | || |||| || || ||||||||||||||| Sbjct 13021 TAGTGATGA---CTGCATTACTGTAGAGATGAATTATTCTGACAATCCTTGGTTTCCTTC 12965 Query 1084 TGTGCTCGAGCAAGAGCGGCTAAATGACAAACAGCGGCTTGATGATGCGACTTATCGCTG 1143 || | || | ||| ||| || | | || | || |||||||| |||||| || Sbjct 12964 GGTATTAGAAGGCGTTAGGCAAAAGGATAGAGAGAGACTCGATGATGCAACTTATGCTTG 12905 Query 1144 GATTTGGGAAGGTGCTTATTTGGAA 1168 | | ||||||||||||||||| ||| Sbjct 12904 GGTGTGGGAAGGTGCTTATTTAGAA 12880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154790242522912