Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq147342 194 2e-44 seq88474 120 3e-22 seq216702 102 8e-17 seq21991 96.9 4e-15 >seq147342 Length=17694 Score = 194 bits (214), Expect = 2e-44 Identities = 274/391 (70%), Gaps = 24/391 (6%) Strand=Plus/Plus Query 140248 CATGGACGCAAACATCCTAAGTCAAATTCACCTGGGTTCCAGAAAGTAATAATTTCTCCA 140307 || |||||||| || || | ||||||||||| ||||| ||||||| || ||||| || Sbjct 2081 CAGGGACGCAAGCAGCCCATTTCAAATTCACCAGGGTTATAGAAAGTGATGATTTCAGCA 2140 Query 140308 CGGTCATCAATACCTTGGCTTAAATTATCATATACTTTTCTTAGTTGGTCTACA---GAA 140364 |||||||||||||| | |||| |||| |||||| | || || |||| | | Sbjct 2141 CGGTCATCAATACCATTCTTTAAGTTATTGACGACTTTTTTCAGCTGATCTAAATGTGTT 2200 Query 140365 CCATT---------CCAAGAACGTCCTTGGACACCGTAAACACGACCCATATCATCGGGT 140415 |||| ||| || || ||||| ||||| || ||||| |||||||| || Sbjct 2201 CCATCTGGGAGTTGCCATGAGCGCCCTTGAACACCATATACACGCCCCATATCGTCTTCA 2260 Query 140416 CCTTTACGATTAGGATTATTTAACCATGATTCGTTNNNNNNNNNNNNNNNNNNCCATGTA 140475 ||||| |||| |||||||| | ||||| || ||| ||| ||| Sbjct 2261 CCTTTGCGATGGGGATTATTCAGCCATGCTTGGTTTTCGTTTGCATTTGCATTCCAAGTA 2320 Query 140476 TTACACCCAATCTCACGAAATTGTGCAGCACTTGAATACCCACGAAGATATCCTAGCAGT 140535 ||||| ||||| ||||||||||| || ||| | ||| ||||| ||||| || || ||| Sbjct 2321 TTACAACCAATTTCACGAAATTGAGCTGCATTGTCATAGCCACGGAGATAACCGAGAAGT 2380 Query 140536 TCAGCAATAGCAGCTTTATAAAAACTTTTACGTGTAGT-ATCAATAGGAA---ATT---- 140587 ||||| || || |||||||| ||||||||||| || || ||||| |||| ||| Sbjct 2381 TCAGCTATCGCCGCTTTATAGAAACTTTTACGAGTCGTAATCAAGGGGAATTGATTATTA 2440 Query 140588 ----CAGAATATTCTAGGTCAGCGTTAATAA 140614 || |||||| |||||||||||||||| Sbjct 2441 CCAACATCATATTCAAGGTCAGCGTTAATAA 2471 Score = 107 bits (118), Expect = 2e-18 Identities = 228/334 (68%), Gaps = 21/334 (6%) Strand=Plus/Plus Query 139937 CATCTACGGTAACCCAGGTTTCAATATCTTCTAAAGATTGAATGTTATCATTAATAATAA 139996 ||||| || ||||| ||||| | ||||||||| || | ||| || |||||||| | Sbjct 1582 CATCTGAAGTTACCCATGTTTCGAGATCTTCTAATGACTTAATTTTGGGGTTAATAATCA 1641 Query 139997 GTTTTGGTGCCTCAAATGGCTCTCTAGAGATATGTTCTGGA----ACCAATTTAAG---- 140048 | || | |||| ||||| | | | | | |||| || ||| ||| Sbjct 1642 ATGAAGGAGAAGCAAAAGGCTCAC----GTTTTAGT-TGGACATCACGCATTAAAGGTAA 1696 Query 140049 TTGGTCTTCATAGATATGAGCATTTGTAATTTTATGAAATACACGCCCAAATTTATTGCC 140108 ||||| |||||||||||| ||||| |||||||||| | | || ||||| || Sbjct 1697 TTGGTTTTCATAGATATGTGCATTCACAATTTTATGATAAGCCTTACCTGCTTTATGCCC 1756 Query 140109 GGTAATTTGTGCCATTA-AGCGTAATAAAACATAACACTGTACCATATTAAAATTTAATC 140167 ||||| | ||||||| |||| | ||||||| |||| ||||| || |||||||| | Sbjct 1757 TGTAATACGAGCCATTAGAGCG-AGTAAAACAAAACATTGTACTTGGTTGAAATTTAAAC 1815 Query 140168 CCAATGGGACATCACATGATCTTTGGTATGAAGTTAAATATAATGTGCTATTAACTAA-- 140225 | | || |||||||| | ||||| || ||||||| || | ||| | |||| Sbjct 1816 CAAGCGGAACATCACAGCTACGCTGGTAAGATGTTAAATGTAGCG---TATCACCTAATA 1872 Query 140226 -AGAAAAATTATGTGTATGCATACATGGACGCAA 140258 |||||| |||| |||||||| || |||||||| Sbjct 1873 GTGAAAAAGTATGAGTATGCATGCAGGGACGCAA 1906 >seq88474 Length=25282 Score = 120 bits (132), Expect = 3e-22 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 64857 AAATGGTACACACTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCTA 64916 ||||||||| | ||||||||||||||||||||||||| ||||||||||| | |||||||| Sbjct 823 AAATGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 882 Query 64917 TCCAACTGAGCTAAGTGTGCATTATTAAT 64945 ||||||||||||||| | ||||| |||| Sbjct 883 TCCAACTGAGCTAAGGGCGCATTGATAAT 911 >seq216702 Length=10464 Score = 102 bits (112), Expect = 8e-17 Identities = 229/339 (68%), Gaps = 4/339 (1%) Strand=Plus/Plus Query 41815 TCAACAGGTGTATTTGTTCCAAAATAATCAAGATTTTCTACAGCA-TAATCCCAAACTTG 41873 |||| ||||| || || ||| ||||| | || || | ||| || ||||| || | Sbjct 462 TCAATGGGTGTGTTAGTACCATAATAAGGCACATGTTG-ATAGCTGTAGTCCCACACGTC 520 Query 41874 TTCTAATGCTTTTAAATTATCTTTCATATTAGGAAGTTCTACATAAGAAATATGACCACC 41933 |||||| ||| | | ||||| || | || ||| ||| ||||| ||||| ||| || Sbjct 521 TTCTAAGGCTCTAACATTATGTTGTAAGTTTGGATATTCGCCATAACAAATAAAACCGCC 580 Query 41934 AGTGGCAATACGATGATAATCCTTTTCAAAATCAATTTTTTCAAACGGGTTAACTTTACG 41993 | | || | | | ||| | ||||||||||||||| || | || || || | Sbjct 581 ATTCGCGAGTGCAGGGTAAGGCGCTTCAAAATCAATTTTATCGTAAGGATTCACCTGTTT 640 Query 41994 TTCTACATCAAGGTGAAAACTATTTGTATACCAACCTTTATCTGTAATTCCTT-TAACAG 42052 ||| ||||| || || || || |||||||| ||||||| || |||| |||| || || Sbjct 641 TTCAACATCTAGATGGAAGCTGTTTGTATAGTAACCTTTGTCGGTAACACCTTGTATCA- 699 Query 42053 AACCAAATTCTGCTTTATCTAATTTACAGAATCTGTGGCATAGACTTTCAGCAGGAGTAG 42112 ||||||||| || |||| | ||||| | || ||||| ||||| || || Sbjct 700 CACCAAATTCAGCGGTATCGAGACGGCAGAAGCGGTCACATAGGTTTTCACTTGGTGTGC 759 Query 42113 AATAAAGACTGAATGCATATCCAGTTTCTTCTTTCCATT 42151 || | |||||| |||| || |||| ||||||||| Sbjct 760 TGTATAAACTGAAACCATAGCCTGTTTGGGCTTTCCATT 798 >seq21991 Length=9696 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 137421 AAATAAGCATCATACATACCAGGGATTTCATGTGGACTAAACAATGTAATATAATCATCA 137480 ||| | |||||||| | ||| || | || |||||| || |||||||||| | | Sbjct 6567 AAAAATGCATCATAAAGACCTGGAACGTCTGATGGACTGAATAATGTAATATCTTGGTTT 6508 Query 137481 TTAATTAGTCGTTCAATCATAAGGTCATTAATTTGAACACCATAATCTAAATGACGAATA 137540 ||||| | || ||| ||| | | || | ||| ||||| ||||| | ||| |||| | Sbjct 6507 TTAATCAAACGCTCATACATTAACTTGTTGAGTTGCACACCGTAATCCATATGGCGAACA 6448 Query 137541 CGGTTTTCTTCAATACCTTTATTATTTTTAAGAACTAACAATTTTTCTAATTCAAGGTGC 137600 ||||| |||||| || ||||||||| || || || || |||| | |||||||||| Sbjct 6447 CGGTTACCTTCAACCCCACGATTATTTTTCAGTACCAATAAACTTTCAACTTCAAGGTGC 6388 Query 137601 CACATTGGGTA 137611 || || ||||| Sbjct 6387 CAAATAGGGTA 6377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516169061079840