Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq147342 187 3e-42 seq21991 113 5e-20 >seq147342 Length=17694 Score = 187 bits (206), Expect = 3e-42 Identities = 315/446 (71%), Gaps = 10/446 (2%) Strand=Plus/Minus Query 16886 TGAAGGACAATGGGTTAAAAACGAACGAACTGGAACACAATGTCTGACACTAATCAACGC 16945 ||| || ||||||||| ||||| |||| || || | ||| | || | || ||||| Sbjct 2521 TGAGGGCCAATGGGTTGAAAACAAACGTACAGGTGTTCGTTGTTTAACCGTTATTAACGC 2462 Query 16946 CGATTTGGTCTATAATGTCGATCAGAACGAAGTTCCTATGGTAACAACTCGCAAAACATT 17005 || | | ||| |||| | | | || || | || || | || ||||| |||| || Sbjct 2461 TGACCTTGAATATGATGTTGGTAATAATCAATTCCCCTTGATTACGACTCGTAAAAGTTT 2402 Query 17006 TTATC--GCGGCGCTATTGCTGAACTGCTTGGATATCTACGAGGATACGACAATGCTGCC 17063 ||| |||||| || |||||||| || || ||||| || || || |||||||| || Sbjct 2401 CTATAAAGCGGCGATA--GCTGAACTTCTCGGTTATCTCCGTGGCTATGACAATGCAGCT 2344 Query 17064 GATTTTCGAGCCATAGGTTGTAACACATGGAATGCTAACGCCAACGAAAACGAAGCTTGG 17123 | ||||| | || |||||||| || |||||||| || || ||||||||| |||| ||| Sbjct 2343 CAATTTCGTGAAATTGGTTGTAATACTTGGAATGCAAATGCAAACGAAAACCAAGCATGG 2284 Query 17124 TTGAAGAATCCCAATCGTAAAGGTGAGGACGATATGGGACGAGTGTATGGCGTTCAGGGT 17183 |||| |||||| |||| |||||||| ||||||||||| || || ||||| ||||| || Sbjct 2283 CTGAATAATCCCCATCGCAAAGGTGAAGACGATATGGGGCGTGTATATGGTGTTCAAGGG 2224 Query 17184 CG-TCAGTGGACAAACATGTATGGCGATTCACTT-GACCAATTGCGCAAAATATACGATA 17241 || ||| ||| | | |||| | || || || || || ||| | | ||| Sbjct 2223 CGCTCA-TGGCAACTCCCAGATGG-AACACATTTAGATCAGCTGAAAAAAGTCGTCAATA 2166 Query 17242 ATCTTCGA-AATCGAAAAGATGACCGTGGTGAAATTCTGACTTTCTGGAATCCAGGTGAA 17300 | ||| | ||| | | |||||||||| |||||| | ||||||| || || |||||| Sbjct 2165 A-CTTAAAGAATGGTATTGATGACCGTGCTGAAATCATCACTTTCTATAACCCTGGTGAA 2107 Query 17301 TTCGAATTCGGATGTCTGCGTCCTTG 17326 || ||| | || || ||||||| || Sbjct 2106 TTTGAAATGGGCTGCTTGCGTCCCTG 2081 >seq21991 Length=9696 Score = 113 bits (124), Expect = 5e-20 Identities = 273/406 (67%), Gaps = 8/406 (2%) Strand=Plus/Plus Query 20094 ATGTTCGAAAACTTAATTGAAAAGCAGTTGAGTTTCTTCTGGCGTCCTGAAGAGGTTGAC 20153 || || ||||| | |||||||| || ||| || |||||||| |||||||| |||||| Sbjct 8249 ATTTTTGAAAAGCTGATTGAAAAACAATTGTCGTTTTTCTGGCGCCCTGAAGAAGTTGAC 8308 Query 20154 GTAACTCGTGATAAGATCGATTATGATAATTTACCAGAACATGAAAAACATATCTTTACT 20213 ||| |||| || || || ||| || || ||||| || ||||||||||| |||| Sbjct 8309 GTATCTCGCGACCGTATTGACTATAATGCGTTGCCAGATCACGAAAAACATATTTTTATC 8368 Query 20214 TCCAATTTGAAGTATCAGAGCTTACTCGATACCGTTCAGGGACGTGCTCCTAACACTGCT 20273 ||| |||| || || | | || || | ||||||| || ||||| || Sbjct 8369 AGTAATCTGAAATACCAAACGCTGCTGGACTCTATTCAGGGCCGCAGCCCTAATGTGGCA 8428 Query 20274 TTTATGTCCATCGTATCTGAT--GTAACACTTGACACATGGATTCCTACCTGGGCGTTCT 20331 || || | | | || ||| | | ||| || || ||| || || |||||||| | Sbjct 8429 TTATTGCCGCTGATTTC-GATTCCTGA-ACTGGAAACTTGGGTTGAAACGTGGGCGTTTT 8486 Query 20332 CGGAGACAATCCACAGTCGTTCTTATACACACATTATGCGCAACGTGTA-CGAA-GATCC 20389 | || || |||||| ||||| |||||||||||||| || || | || ||| || || Sbjct 8487 CTGAAACTATCCACTCACGTTCATATACACACATTATTCGTAA--TATAGTGAATGACCC 8544 Query 20390 GTCCAAGATCTTTGACGAAATCGTTCTTGATTCTGCAATCATGAAGCGTGCTGATGCTGT 20449 ||| || |||||||| |||||| || | ||| | ||||||||| | | | | Sbjct 8545 AGCCATTATTTTTGACGATATCGTTGAAAATGAAGAAATTTTAAAGCGTGCTAAAGATAT 8604 Query 20450 TACCCGCTATTACGACCAACTGATTAACGCGACCACTGATTATCAT 20495 | | | | |||||| | ||||| | ||||| | | |||||| Sbjct 8605 TTCTGGTTTTTACGATGACCTGATCGAAATGACCAATTACTATCAT 8650 Score = 109 bits (120), Expect = 6e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 18439 CGCGCTGGTATCGGTATTAACGCTGGTCGAATTCGTGCGGAAGGAAGTCAAGTTCGCTCT 18498 || || ||||| || | || || || || |||||||| ||| || | | |||| | Sbjct 6026 CGTGCAGGTATTGGGGTAAATGCAGGCCGCATTCGTGCATTAGGCAGCCCAATTCGTGGT 6085 Query 18499 GGTGAAGTCAAACACACTGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAA 18558 ||||||| ||||||||| |||||| |||| ||||| ||||| ||||| || ||| Sbjct 6086 GGTGAAGCGTTCCACACTGGTTGTATTCCGTTCTATAAACACTTCCAAACTGCGGTGAAA 6145 Query 18559 TCGTGTTCACAAGGCGGTGTTCGTGGTGGTGCGGCAAC 18596 || ||||| ||||| || |||||||||||||| ||||| Sbjct 6146 TCTTGTTCGCAAGGTGGCGTTCGTGGTGGTGCTGCAAC 6183 Score = 102 bits (112), Expect = 9e-17 Identities = 200/293 (68%), Gaps = 11/293 (4%) Strand=Plus/Plus Query 20571 AAGAAAC---TGTATCTGTGTATGCACGCCGTTAACGCACTGGAAGCAATTCGTTTCTAT 20627 ||||||| |||||||||| | |||||| || || ||||| || ||||||||| Sbjct 8899 AAGAAACAGCTGTATCTGTGCCTAATGAGCGTTAATGCGCTCGAAGCCATCCGTTTCTAT 8958 Query 20628 GTTTCGTTTGCTTGCACCTTTGCATTTGCAGAAGATAAGAAAATGGAAGGCAGTGCTAAA 20687 ||| ||||| || | ||||| ||||| ||| | |||||||| | ||||||| Sbjct 8959 GTTAGCTTTGCCTGTTCATTTGCGTTTGCTGAACGCGAACTGATGGAAGGAAATGCTAAA 9018 Query 20688 ATTATGCGTCTGATTGCGCGTGATGAACAACTGCACTTGAAAGGCACACAATATATGCTG 20747 || || || || || ||||||||| |||||||| | || |||||| | ||| || Sbjct 9019 ATCATCAAGCTAATCGCACGTGATGAAGCGCTGCACTTAACTGGAACACAACACATGTTG 9078 Query 20748 CGTATTTGGCAGCAAGGTAAAGATGATCCTGAAATGATCGAAATTGCCAAAGAGTGTGAA 20807 | | || ||| ||||||| || |||||| |||||| || ||||| || Sbjct 9079 AACCTGTTGCGCTCAGGGCAAGATGACCCAGAAATGGCCGAAATCGCGGCAGAGT-NCAA 9137 Query 20808 GAAGAAGCTGTTA--AATTGTTCTTGGAAGTTGCCGAACAAGAAAAAGAATGG 20858 || ||||| | |||||| | ||| || || ||||||||||| ||| Sbjct 9138 GA-----GTGTTATGACTTGTTCGTTCAAGCAGCAGAGCAAGAAAAAGAGTGG 9185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580410912496800