Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq147342 187 3e-42
seq21991 113 5e-20
>seq147342
Length=17694
Score = 187 bits (206), Expect = 3e-42
Identities = 315/446 (71%), Gaps = 10/446 (2%)
Strand=Plus/Minus
Query 16886 TGAAGGACAATGGGTTAAAAACGAACGAACTGGAACACAATGTCTGACACTAATCAACGC 16945
||| || ||||||||| ||||| |||| || || | ||| | || | || |||||
Sbjct 2521 TGAGGGCCAATGGGTTGAAAACAAACGTACAGGTGTTCGTTGTTTAACCGTTATTAACGC 2462
Query 16946 CGATTTGGTCTATAATGTCGATCAGAACGAAGTTCCTATGGTAACAACTCGCAAAACATT 17005
|| | | ||| |||| | | | || || | || || | || ||||| |||| ||
Sbjct 2461 TGACCTTGAATATGATGTTGGTAATAATCAATTCCCCTTGATTACGACTCGTAAAAGTTT 2402
Query 17006 TTATC--GCGGCGCTATTGCTGAACTGCTTGGATATCTACGAGGATACGACAATGCTGCC 17063
||| |||||| || |||||||| || || ||||| || || || |||||||| ||
Sbjct 2401 CTATAAAGCGGCGATA--GCTGAACTTCTCGGTTATCTCCGTGGCTATGACAATGCAGCT 2344
Query 17064 GATTTTCGAGCCATAGGTTGTAACACATGGAATGCTAACGCCAACGAAAACGAAGCTTGG 17123
| ||||| | || |||||||| || |||||||| || || ||||||||| |||| |||
Sbjct 2343 CAATTTCGTGAAATTGGTTGTAATACTTGGAATGCAAATGCAAACGAAAACCAAGCATGG 2284
Query 17124 TTGAAGAATCCCAATCGTAAAGGTGAGGACGATATGGGACGAGTGTATGGCGTTCAGGGT 17183
|||| |||||| |||| |||||||| ||||||||||| || || ||||| ||||| ||
Sbjct 2283 CTGAATAATCCCCATCGCAAAGGTGAAGACGATATGGGGCGTGTATATGGTGTTCAAGGG 2224
Query 17184 CG-TCAGTGGACAAACATGTATGGCGATTCACTT-GACCAATTGCGCAAAATATACGATA 17241
|| ||| ||| | | |||| | || || || || || ||| | | |||
Sbjct 2223 CGCTCA-TGGCAACTCCCAGATGG-AACACATTTAGATCAGCTGAAAAAAGTCGTCAATA 2166
Query 17242 ATCTTCGA-AATCGAAAAGATGACCGTGGTGAAATTCTGACTTTCTGGAATCCAGGTGAA 17300
| ||| | ||| | | |||||||||| |||||| | ||||||| || || ||||||
Sbjct 2165 A-CTTAAAGAATGGTATTGATGACCGTGCTGAAATCATCACTTTCTATAACCCTGGTGAA 2107
Query 17301 TTCGAATTCGGATGTCTGCGTCCTTG 17326
|| ||| | || || ||||||| ||
Sbjct 2106 TTTGAAATGGGCTGCTTGCGTCCCTG 2081
>seq21991
Length=9696
Score = 113 bits (124), Expect = 5e-20
Identities = 273/406 (67%), Gaps = 8/406 (2%)
Strand=Plus/Plus
Query 20094 ATGTTCGAAAACTTAATTGAAAAGCAGTTGAGTTTCTTCTGGCGTCCTGAAGAGGTTGAC 20153
|| || ||||| | |||||||| || ||| || |||||||| |||||||| ||||||
Sbjct 8249 ATTTTTGAAAAGCTGATTGAAAAACAATTGTCGTTTTTCTGGCGCCCTGAAGAAGTTGAC 8308
Query 20154 GTAACTCGTGATAAGATCGATTATGATAATTTACCAGAACATGAAAAACATATCTTTACT 20213
||| |||| || || || ||| || || ||||| || ||||||||||| ||||
Sbjct 8309 GTATCTCGCGACCGTATTGACTATAATGCGTTGCCAGATCACGAAAAACATATTTTTATC 8368
Query 20214 TCCAATTTGAAGTATCAGAGCTTACTCGATACCGTTCAGGGACGTGCTCCTAACACTGCT 20273
||| |||| || || | | || || | ||||||| || ||||| ||
Sbjct 8369 AGTAATCTGAAATACCAAACGCTGCTGGACTCTATTCAGGGCCGCAGCCCTAATGTGGCA 8428
Query 20274 TTTATGTCCATCGTATCTGAT--GTAACACTTGACACATGGATTCCTACCTGGGCGTTCT 20331
|| || | | | || ||| | | ||| || || ||| || || |||||||| |
Sbjct 8429 TTATTGCCGCTGATTTC-GATTCCTGA-ACTGGAAACTTGGGTTGAAACGTGGGCGTTTT 8486
Query 20332 CGGAGACAATCCACAGTCGTTCTTATACACACATTATGCGCAACGTGTA-CGAA-GATCC 20389
| || || |||||| ||||| |||||||||||||| || || | || ||| || ||
Sbjct 8487 CTGAAACTATCCACTCACGTTCATATACACACATTATTCGTAA--TATAGTGAATGACCC 8544
Query 20390 GTCCAAGATCTTTGACGAAATCGTTCTTGATTCTGCAATCATGAAGCGTGCTGATGCTGT 20449
||| || |||||||| |||||| || | ||| | ||||||||| | | | |
Sbjct 8545 AGCCATTATTTTTGACGATATCGTTGAAAATGAAGAAATTTTAAAGCGTGCTAAAGATAT 8604
Query 20450 TACCCGCTATTACGACCAACTGATTAACGCGACCACTGATTATCAT 20495
| | | | |||||| | ||||| | ||||| | | ||||||
Sbjct 8605 TTCTGGTTTTTACGATGACCTGATCGAAATGACCAATTACTATCAT 8650
Score = 109 bits (120), Expect = 6e-19
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 18439 CGCGCTGGTATCGGTATTAACGCTGGTCGAATTCGTGCGGAAGGAAGTCAAGTTCGCTCT 18498
|| || ||||| || | || || || || |||||||| ||| || | | |||| |
Sbjct 6026 CGTGCAGGTATTGGGGTAAATGCAGGCCGCATTCGTGCATTAGGCAGCCCAATTCGTGGT 6085
Query 18499 GGTGAAGTCAAACACACTGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAA 18558
||||||| ||||||||| |||||| |||| ||||| ||||| ||||| || |||
Sbjct 6086 GGTGAAGCGTTCCACACTGGTTGTATTCCGTTCTATAAACACTTCCAAACTGCGGTGAAA 6145
Query 18559 TCGTGTTCACAAGGCGGTGTTCGTGGTGGTGCGGCAAC 18596
|| ||||| ||||| || |||||||||||||| |||||
Sbjct 6146 TCTTGTTCGCAAGGTGGCGTTCGTGGTGGTGCTGCAAC 6183
Score = 102 bits (112), Expect = 9e-17
Identities = 200/293 (68%), Gaps = 11/293 (4%)
Strand=Plus/Plus
Query 20571 AAGAAAC---TGTATCTGTGTATGCACGCCGTTAACGCACTGGAAGCAATTCGTTTCTAT 20627
||||||| |||||||||| | |||||| || || ||||| || |||||||||
Sbjct 8899 AAGAAACAGCTGTATCTGTGCCTAATGAGCGTTAATGCGCTCGAAGCCATCCGTTTCTAT 8958
Query 20628 GTTTCGTTTGCTTGCACCTTTGCATTTGCAGAAGATAAGAAAATGGAAGGCAGTGCTAAA 20687
||| ||||| || | ||||| ||||| ||| | |||||||| | |||||||
Sbjct 8959 GTTAGCTTTGCCTGTTCATTTGCGTTTGCTGAACGCGAACTGATGGAAGGAAATGCTAAA 9018
Query 20688 ATTATGCGTCTGATTGCGCGTGATGAACAACTGCACTTGAAAGGCACACAATATATGCTG 20747
|| || || || || ||||||||| |||||||| | || |||||| | ||| ||
Sbjct 9019 ATCATCAAGCTAATCGCACGTGATGAAGCGCTGCACTTAACTGGAACACAACACATGTTG 9078
Query 20748 CGTATTTGGCAGCAAGGTAAAGATGATCCTGAAATGATCGAAATTGCCAAAGAGTGTGAA 20807
| | || ||| ||||||| || |||||| |||||| || ||||| ||
Sbjct 9079 AACCTGTTGCGCTCAGGGCAAGATGACCCAGAAATGGCCGAAATCGCGGCAGAGT-NCAA 9137
Query 20808 GAAGAAGCTGTTA--AATTGTTCTTGGAAGTTGCCGAACAAGAAAAAGAATGG 20858
|| ||||| | |||||| | ||| || || ||||||||||| |||
Sbjct 9138 GA-----GTGTTATGACTTGTTCGTTCAAGCAGCAGAGCAAGAAAAAGAGTGG 9185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 580410912496800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |