Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq216702 129 9e-25 seq21991 105 1e-17 >seq216702 Length=10464 Score = 129 bits (142), Expect = 9e-25 Identities = 532/821 (65%), Gaps = 36/821 (4%) Strand=Plus/Plus Query 125293 CATAACAGATGAAACCACCGTTTGCATGAATTGGGTATGCAGCTTCAAAATCAATTTTCT 125352 ||||||| || ||||| || || || | ||||| | ||||||||||||||||| | Sbjct 562 CATAACAAATAAAACCGCCATTCGCGAGTGCAGGGTAAGGCGCTTCAAAATCAATTTTAT 621 Query 125353 CAAATGGGTTCACTT--TCTTGAACACGTCTAAGTGAAACGAGTTTGTGTAATAGTCTTT 125410 | | || ||||| | | || |||| |||| || || |||||| || || |||| Sbjct 622 CGTAAGGATTCACCTGTTTTTCAACA--TCTAGATGGAAGCTGTTTGTATAGTAACCTTT 679 Query 125411 GTCATTGATACCTGTAATAACACCGTATTTCTCTTGGTCGAGACGACAGAAACGATCACA 125470 ||| | | |||| || ||||| ||| | |||||||| ||||| || ||||| Sbjct 680 GTCGGTAACACCTTGTATCACACCAAATTCAGCGGTATCGAGACGGCAGAAGCGGTCACA 739 Query 125471 TAGCGATTCACTTGGTGTACTGTACAGACTGAAACCGTAGCCCGTCAGTTCTTTCCATGC 125530 ||| |||||||||||| ||||| | ||||||||| ||||| || | |||||||| | Sbjct 740 TAGGTTTTCACTTGGTGTGCTGTATAAACTGAAACCATAGCCTGTTTGGGCTTTCCATTC 799 Query 125531 ATCGGTG--TACGCTCTAAGAGTTTCCACAATCTTTTCAGCGAGGAATTGTTTGTGTTGT 125588 ||||||| | || |||| | || ||||| | ||| | || || || | Sbjct 800 ATCGGTGGCTTGGCG-TAAGTGATTG-ACAATTT------CGACGGCTTTTTCACGTAAT 851 Query 125589 GACTCA--AACGTATGCATGTCTTTATCTGGCGAAAGCAACGTTACTGCTT-CGTGTAAC 125645 || | | || |||| | | | || | ||| | || || || | || ||| Sbjct 852 TTTTCGTCATCATAGACATGGGTCTGTGTGCCAAAAAGTGCATTGATGGTTTCATGCAAC 911 Query 125646 CCGATATAACCAAGCGAGATACTTGAACGACCGTGTTTGAAAACTTCACTGACTTTATCA 125705 || || ||||| | ||| || | ||||| | |||||| | ||| || || ||| Sbjct 912 CCAATGTAACCTAACGAAATGGACGCGCGACCATTTTTGAAGATCTCAGCAACGTTGTCA 971 Query 125706 GTTGGCTTCAAGCGTACGCCCATTGCACCTTCACAGTATAGAATTGGAGCAACTGATGCA 125765 | || ||||| || || || ||||| || | |||||| ||||| || Sbjct 972 TCCGCTTTTAAGCGAACTCCGCAGGCGCCTTCCATATACAAAATTGGGGCAACACGCGCT 1031 Query 125766 GTTACATCATCAAAACGCTTAATACGCAACATCAATGCTTCGTAAGCTA-GTTTACAACG 125824 |||| || ||||| ||| || ||| || |||| | || | | || |||| Sbjct 1032 TTTACGGTTTCTAAACGGGCAATGCGAGTCATTAAGGCTTTTTTGGCAATGGCTA-AACG 1090 Query 125825 CTCGT---GTAAGATCTCGAAGAAGCGT--TCAGTATCACCCGATGCTTCAATAGCAATA 125879 || | |||| | | || | || | || | ||| |||||| ||||||||| Sbjct 1091 TTCATCCAGTAA--TGCCCAAAACGCATCTTCGCTG---CCCTGTGCTTCGATAGCAATA 1145 Query 125880 CGCGGGATATTGATTGAGACGACGCCTAAGTTATTACGACCATC--GAATACCGTTTCAC 125937 || || | ||||| | |||||||| || || || ||||| |||| ||| | | Sbjct 1146 CGAGGCAAATTGAGGCTAATAACGCCTAAATTGTTGCGCCCATCGTGAAT-TTGTTGC-C 1203 Query 125938 CATCTTCGTTCTTCCAGTCACCCAAGAATGAGCGACAGCCCATTGGAGACTTAAACCCAC 125997 ||| ||| || || ||||||||| ||| |||||||| || | ||||| | Sbjct 1204 CATTTTC---CTCATAGATACCCAAGAAACTGCGGCAGCCCATCGGCGTTTTAAATGATC 1260 Query 125998 CAGTCGTTTCAACTAGTTTGTCATAGTTCAAAATGTCTGGGTACATACGCTTACTTGCAC 126057 |||| ||||| | ||| ||||| | ||| || |||||||| |||||||| |||| Sbjct 1261 CAGTAACATCAACGACACGGTCGTAGTTAAGAATATCGGGGTACATGCGCTTACTGGCAC 1320 Query 126058 ATTCAAGAGCTAACTTTTTGATGCCGTAGCACGGGTCGCCT 126098 | || | ||| | | ||| ||| |||| ||||| ||| Sbjct 1321 ACTCTAAAGCGAGTTGTTTTATGTCGTAATTAGGGTCACCT 1361 >seq21991 Length=9696 Score = 105 bits (116), Expect = 1e-17 Identities = 124/164 (76%), Gaps = 8/164 (5%) Strand=Plus/Minus Query 236362 GTCGCAGCACCACCACGTACACCACCTTGAGAACACGATTTAACCGCAGTTTGAAAGTGT 236421 || |||||||||||||| || |||||||| ||||| ||||| ||||||||||| |||||| Sbjct 6183 GTTGCAGCACCACCACGAACGCCACCTTGCGAACAAGATTTCACCGCAGTTTGGAAGTGT 6124 Query 236422 TTCCAGAATGGAATTACACCAGTGTG--ACGAATCTCACCTGAACGAA--CGACTGCCCC 236477 || |||| ||||| ||||||||| ||| ||||| ||||| | ||| || Sbjct 6123 TTATAGAACGGAATACAACCAGTGTGGAACG--CTTCACCACCACGAATTGGGCTG--CC 6068 Query 236478 TTCAGCACGAATCGCACCGCCATTCACACCGATACCTGCACGCT 236521 | |||||||| || |||| || || ||||||||||||| Sbjct 6067 TAATGCACGAATGCGGCCTGCATTTACCCCAATACCTGCACGCT 6024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790586562823680