Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028927.1 Length=167298 Score E Sequences producing significant alignments: (Bits) Value seq21991 87.8 2e-12 seq21034 84.2 2e-11 seq123162 82.4 8e-11 >seq21991 Length=9696 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 43508 GGACTGAACAAAGTAATGTAGTCGTTCTTTCCAAAACGTTCCATCATTAGATCATTCAGT 43567 |||||||| || ||||| | | ||| || ||||| || ||||| | || ||| Sbjct 6534 GGACTGAATAATGTAATATCTTGGTTTTTAATCAAACGCTCATACATTAACTTGTTGAGT 6475 Query 43568 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 43627 || ||||| ||||||||||| |||| ||||| |||| || || |||||||||| Sbjct 6474 TGCACACCGTAATCCATATGGCGAACACGGTTACCTTCAACCCCACGATTATTTTTCAGT 6415 Query 43628 ACAAGAAGATTTTCAACTTCCAAATGCCAAATAGGATA 43665 || | | | |||||||||| | ||||||||||| || Sbjct 6414 ACCAATAAACTTTCAACTTCAAGGTGCCAAATAGGGTA 6377 >seq21034 Length=11989 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 131513 GTAAAGGTACGAGCAATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 131572 || || ||||||| ||||||||| |||| ||||| |||||| ||||| || || || Sbjct 3711 GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGTGAGTTGAAACGTACA 3652 Query 131573 GCATAACCGGATACACGGATGGTCAGCTG 131601 |||||||| ||||||||||| ||||| || Sbjct 3651 GCATAACCTGATACACGGATAGTCAGTTG 3623 >seq123162 Length=2732 Score = 82.4 bits (90), Expect = 8e-11 Identities = 119/162 (73%), Gaps = 11/162 (7%) Strand=Plus/Minus Query 140508 GAATCGAACCGCCGACGTCCTCATTACAAGTGAGTTGCTCTACCTACTGAGCTAAATCAG 140567 || |||||| | ||| | || ||||||||| |||||||||||| |||||||||| | | Sbjct 274 GAGTCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCAACTGAGCTAAGCCGG 215 Query 140568 CAAAAACTGGCGGAGGCGATAG-GATTTGAAC-CTATGA--GTCGCCGGAGCGACTGCCG 140623 | || | ||||||| | ||||| |||| |||| ||| || || | | | | || Sbjct 214 CGAATA-TGGCGGA-GAGATAGAGATTCGAACTCTAGGATGGTTTC-----CCATCGGCG 162 Query 140624 GTTTTCAAGACCGGTGCATTAAACCACTCTGCCACGCCTCCA 140665 ||||||||||||| ||| || ||| ||| |||| ||||| Sbjct 161 GTTTTCAAGACCGCTGCCTTCGACCGCTCGGCCATCTCTCCA 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533090076617280