Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_028956.1
Length=52139
Score E
Sequences producing significant alignments: (Bits) Value
seq182390 170 6e-38
seq309423 105 2e-18
>seq182390
Length=24147
Score = 170 bits (188), Expect = 6e-38
Identities = 343/505 (68%), Gaps = 8/505 (2%)
Strand=Plus/Minus
Query 668 GGCGTTATTCTTTGCGGTCGTGAGTTTATGAACTCATTGGAAGAAAGCTCTCTTGAAGAA 727
|| || || ||||||| ||||||||| |||||||| | |||||| || | || |||
Sbjct 13380 GGGGTGATACTTTGCGCTCGTGAGTTCATGAACTCCCTTGAAGAATCATCGATGGAGGAA 13321
Query 728 GTTAAACAGGCGATCAAGTCTGAGCCTTTTTTAGCAAAtttttttGATGTCGGCGAGAAG 787
|| ||||| ||||| | | | | || | |||||| ||||||| | ||||| |||
Sbjct 13320 GTCAAACAAGCGATAAGGGCGGTTCCCTGGTTAGCAGCCCATTTTGATATTGGCGAAAAG 13261
Query 788 TATGTTCGCACTAAAGATGGGCGGATTTCTTATGTGTTTTCCGGACTTCGGCATAACTTA 847
|| || | || ||| | || |||||| || | ||| || || || || ||
Sbjct 13260 TACATTAGAACCGTTGATCGAAAAGTTAGTTATGTTTTCTGCGGGCTACGCCACAATTTG 13201
Query 848 GATAGCATCAAATCTAAAGCCCGTATTTTGATTGCGTGGATAGATGAAGCAGAAACAGTA 907
|| || || |||||||| || | ||| | || ||| | |||||||| ||||| ||
Sbjct 13200 GACAGTATAAAATCTAAGGCAAGAATTCTACTTTGCTGGGTTGATGAAGCCGAAACTGTT 13141
Query 908 AGCGAAACTGCTTGGCGGAAATTAATTCCAACCGTGCGTGAGAATAATTCCGAAATATGG 967
|| ||||| || |||| ||| | ||| || || ||||| | || || |||||||||
Sbjct 13140 AGTGAAACAGCATGGCAAAAACTGGATCCGACGGTACGTGAAGACAACTCGGAAATATGG 13081
Query 968 GTAACTTGGAACCCGGAAAATAGA-GGGAGCGCAACAGATACTCGCTTCAGGCAAAATCC 1026
||||| |||||||| ||||| ||| || || || || |||| || || || | ||| |
Sbjct 13080 GTAACGTGGAACCCTGAAAA-AGATGGTAGTGCTACGGATAAACGGTTTAGAAAGAATGC 13022
Query 1027 ACCTGAAAACAGCTGCATAA---TTGAAATGAGTTACCAAGATAATCCTTGGTTTCCTGA 1083
||| | |||||| | | || |||| ||| || |||||||||||||||
Sbjct 13021 TAGTGATGA---CTGCATTACTGTAGAGATGAATTATTCTGACAATCCTTGGTTTCCTTC 12965
Query 1084 TGTGCTCGAGCAAGAGCGGCTAAATGACAAACAGCGGCTTGATGATGCGACTTATCGCTG 1143
|| | || | ||| ||| || | | || | || |||||||| |||||| ||
Sbjct 12964 GGTATTAGAAGGCGTTAGGCAAAAGGATAGAGAGAGACTCGATGATGCAACTTATGCTTG 12905
Query 1144 GATTTGGGAGGGGGACTACTTAGAA 1168
| | ||||| || | || ||||||
Sbjct 12904 GGTGTGGGAAGGTGCTTATTTAGAA 12880
>seq309423
Length=1544
Score = 105 bits (116), Expect = 2e-18
Identities = 126/166 (76%), Gaps = 10/166 (6%)
Strand=Plus/Minus
Query 41692 TTACCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTTTAATGAGAGGGTTGTTA 41751
|| || |||||||| |||||||| | ||||||| ||||||||||| | ||| ||||||
Sbjct 1181 TTGCCGAGTTCTTCCGCTAAATTAAGTAAACCGACTTTGTGTTTAATAATAGGATTGTTA 1122
Query 41752 GAATAAAACATGAGAGTTTCCT----TTTTGTTTAGATTGATTTTTGACACTCATATTCT 41807
| ||| | |||||||||| ||| ||||||||| || ||| |||| ||| ||
Sbjct 1121 GTATATAGCATGAGAGTTACCTCGTGTTTTGTTTA---AGA-TTTGGACATCTATA-TCA 1067
Query 41808 AAACGGGAAACTCTC-ACTTTTTAGAGTGAATTGTCAGATCAAGTC 41852
|||| || ||||||| ||||| | |||| ||||||| ||||||
Sbjct 1066 AAACCGGTAACTCTCAACTTTGCAAGTTGAACTGTCAGACCAAGTC 1021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 166091243629752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |