Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq182390 170 6e-38 seq309423 105 2e-18 >seq182390 Length=24147 Score = 170 bits (188), Expect = 6e-38 Identities = 343/505 (68%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 668 GGCGTTATTCTTTGCGGTCGTGAGTTTATGAACTCATTGGAAGAAAGCTCTCTTGAAGAA 727 || || || ||||||| ||||||||| |||||||| | |||||| || | || ||| Sbjct 13380 GGGGTGATACTTTGCGCTCGTGAGTTCATGAACTCCCTTGAAGAATCATCGATGGAGGAA 13321 Query 728 GTTAAACAGGCGATCAAGTCTGAGCCTTTTTTAGCAAAtttttttGATGTCGGCGAGAAG 787 || ||||| ||||| | | | | || | |||||| ||||||| | ||||| ||| Sbjct 13320 GTCAAACAAGCGATAAGGGCGGTTCCCTGGTTAGCAGCCCATTTTGATATTGGCGAAAAG 13261 Query 788 TATGTTCGCACTAAAGATGGGCGGATTTCTTATGTGTTTTCCGGACTTCGGCATAACTTA 847 || || | || ||| | || |||||| || | ||| || || || || || Sbjct 13260 TACATTAGAACCGTTGATCGAAAAGTTAGTTATGTTTTCTGCGGGCTACGCCACAATTTG 13201 Query 848 GATAGCATCAAATCTAAAGCCCGTATTTTGATTGCGTGGATAGATGAAGCAGAAACAGTA 907 || || || |||||||| || | ||| | || ||| | |||||||| ||||| || Sbjct 13200 GACAGTATAAAATCTAAGGCAAGAATTCTACTTTGCTGGGTTGATGAAGCCGAAACTGTT 13141 Query 908 AGCGAAACTGCTTGGCGGAAATTAATTCCAACCGTGCGTGAGAATAATTCCGAAATATGG 967 || ||||| || |||| ||| | ||| || || ||||| | || || ||||||||| Sbjct 13140 AGTGAAACAGCATGGCAAAAACTGGATCCGACGGTACGTGAAGACAACTCGGAAATATGG 13081 Query 968 GTAACTTGGAACCCGGAAAATAGA-GGGAGCGCAACAGATACTCGCTTCAGGCAAAATCC 1026 ||||| |||||||| ||||| ||| || || || || |||| || || || | ||| | Sbjct 13080 GTAACGTGGAACCCTGAAAA-AGATGGTAGTGCTACGGATAAACGGTTTAGAAAGAATGC 13022 Query 1027 ACCTGAAAACAGCTGCATAA---TTGAAATGAGTTACCAAGATAATCCTTGGTTTCCTGA 1083 ||| | |||||| | | || |||| ||| || ||||||||||||||| Sbjct 13021 TAGTGATGA---CTGCATTACTGTAGAGATGAATTATTCTGACAATCCTTGGTTTCCTTC 12965 Query 1084 TGTGCTCGAGCAAGAGCGGCTAAATGACAAACAGCGGCTTGATGATGCGACTTATCGCTG 1143 || | || | ||| ||| || | | || | || |||||||| |||||| || Sbjct 12964 GGTATTAGAAGGCGTTAGGCAAAAGGATAGAGAGAGACTCGATGATGCAACTTATGCTTG 12905 Query 1144 GATTTGGGAGGGGGACTACTTAGAA 1168 | | ||||| || | || |||||| Sbjct 12904 GGTGTGGGAAGGTGCTTATTTAGAA 12880 >seq309423 Length=1544 Score = 105 bits (116), Expect = 2e-18 Identities = 126/166 (76%), Gaps = 10/166 (6%) Strand=Plus/Minus Query 41692 TTACCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTTTAATGAGAGGGTTGTTA 41751 || || |||||||| |||||||| | ||||||| ||||||||||| | ||| |||||| Sbjct 1181 TTGCCGAGTTCTTCCGCTAAATTAAGTAAACCGACTTTGTGTTTAATAATAGGATTGTTA 1122 Query 41752 GAATAAAACATGAGAGTTTCCT----TTTTGTTTAGATTGATTTTTGACACTCATATTCT 41807 | ||| | |||||||||| ||| ||||||||| || ||| |||| ||| || Sbjct 1121 GTATATAGCATGAGAGTTACCTCGTGTTTTGTTTA---AGA-TTTGGACATCTATA-TCA 1067 Query 41808 AAACGGGAAACTCTC-ACTTTTTAGAGTGAATTGTCAGATCAAGTC 41852 |||| || ||||||| ||||| | |||| ||||||| |||||| Sbjct 1066 AAACCGGTAACTCTCAACTTTGCAAGTTGAACTGTCAGACCAAGTC 1021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166091243629752