Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq220453 105 5e-18 seq157614 96.9 2e-15 seq8809 84.2 2e-11 >seq220453 Length=1779 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || || ||||| || || || |||||| | || || || | || Sbjct 802 ATGCAAATTTTCGTTAAGACTCTGACCGGAAAGACCATTACATTGGAAGTGGAGCCCTCC 743 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 || | | || ||||| ||||| ||||| ||||| |||| || ||| Sbjct 742 GATACTATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGATCAG 683 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 || || | |||||||||||||||||| | || || | |||| |||||||| |||||| Sbjct 682 CAGCGTCTCATTTTTGCCGGAAAACAACTAGAAGATGGGCGCACTTTGTCCGACTACAAC 623 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 || || || ||| ||| | |||||||| |||||| | ||||| ||| Sbjct 622 ATTCAGAAGGAGTCTACTCTACATTTGGTGTTGCGTCTCCGTGGTGGC 575 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || || ||||| || || || |||||| | || || || | || Sbjct 1486 ATGCAAATTTTCGTTAAGACTCTGACCGGAAAGACCATTACATTGGAAGTGGAGCCCTCC 1427 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 || | | || ||||| ||||| ||||| ||||| | || || ||| Sbjct 1426 GATACTATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAG 1367 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| | ||||| ||||||||||| ||||| || | || | ||| |||||||||||| Sbjct 1366 CAACGTCTCATTTTCGCCGGAAAACAGTTGGAAGATGGTCGTACCTTATCCGATTACAAC 1307 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || || ||||| |||||||||||||| | ||| | ||||| || Sbjct 1306 ATTCAGAAAGAATCAACTTTGCATTTGGTGCTCCGTCTCCGTGGTGG 1260 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || || || || | ||||| ||| ||||||| | || ||||| || Sbjct 1030 ATGCAGATCTTCGTTAAGACCTTAACTGGAAAAACTATTACATTGGAAGTCGAGCCATCC 971 Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| | | | ||| || ||| || || ||||| ||||| |||| || | Sbjct 970 GACACTATCGAGAAT--GTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGATC 913 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| | ||||| || || ||||||||||| || | ||||| |||||||||||||| Sbjct 912 AGCAACGTCTCATTTTCGCTGGCAAACAATTGGAAGATGGACGCACCTTGTCCGATTACA 853 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | |||||||| || ||| | || ||||| | ||| | || || || Sbjct 852 ATATCCAAAAGGAATCAACTCTTCACTTGGTCCTACGTCTTCGAGGTGG 804 >seq157614 Length=1694 Score = 96.9 bits (106), Expect = 2e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || |||||||| || ||||| ||||||||||||||||| || | |||| |||||||||| Sbjct 563 GATCAGCAACGTTTGATTTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGAT 622 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || || || || || ||| || |||||||| || || ||||| || || || Sbjct 623 TATAATATTCAGAAGGAGTCTACATTGCATTTAGTATTACGTTTACGAGGAGG 675 >seq8809 Length=5998 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||| || |||| || |||||||| || || || ||||| ||||||||||| Sbjct 4424 GACAAAGAGGGAATTCCTCCAGACCAGCAACGTTTGATCTTCGCCGGCAAACAATTGGAA 4483 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAG 27981 || | ||||| ||||||||||||| ||||| |||||| Sbjct 4484 GATGGACGCACTCTGTCCGATTACAATATCCAGAAAGAG 4522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354478023646692