Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq160110 168 6e-37 seq202068 86.0 5e-12 >seq160110 Length=3910 Score = 168 bits (186), Expect = 6e-37 Identities = 230/318 (72%), Gaps = 5/318 (2%) Strand=Plus/Plus Query 4383 TCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACA 4442 ||||||||||||||||||||||| ||| ||| || || || ||||| | ||| Sbjct 2261 TCAGCTACAAATTCTATATACTGCGACATCAGTGTACAATTCATGCCAATCATCGCCACT 2320 Query 4443 GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTT 4502 |||| |||| ||||||||||| ||||| || | || ||||| | ||||| || | Sbjct 2321 GGTAATGCGTCCGTCAAAAACTCCTGTTCGATCCTCACTGCTTCGGAAATTATTTCAATC 2380 Query 4503 ATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAA 4562 | | | || || || || || | ||||| ||| | ||| | || |||||||||||| Sbjct 2381 ACTCTTTCATTTGAAGGCTTCTGAACTAAATATTTATACATAAGGCAGGCAAAATCACAA 2440 Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 || | ||||| |||| || | ||||||||| || || || || ||||| | |||| Sbjct 2441 TGGAGCCCTTCATCTCGTGAGATTAATTCGTTAGAGAATGTCAAACCAGGCATAATACCT 2500 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAA--TGACCCAGAAAAGAATATGCCTTCTACGG 4680 | ||||| ||||||||||| || ||||| || | | |||| ||||| ||||| || | Sbjct 2501 CGTTTTTTGAGCCAAAATATTGCTGCAAAACTGCCGCTGAAA--AATATCCCTTCAACTG 2558 Query 4681 CGGCAAACGCTACTAATC 4698 | |||||||| | ||||| Sbjct 2559 CAGCAAACGC-AATAATC 2575 Score = 138 bits (152), Expect = 1e-27 Identities = 187/261 (72%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 4820 ATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAA 4879 ||| || || || | | ||| |||||||| ||||| | ||||| || ||||| ||||| Sbjct 2758 ATATGTATCGATCAAAATGCTGTACATTTCGGAATGCACGTTTTCCATTGCAATTTGAAA 2817 Query 4880 TCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTT 4939 ||| |||||||| | || || || ||||| || || | || |||| ||| || | || Sbjct 2818 TCCATAAAAGCAACGTGCCTCAGTGACTTGCACCTCCTGACTGAATCGTTCCACAAGATT 2877 Query 4940 TTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTG 4999 ||||||||| || |||||| ||||| || ||||| || |||||||| | ||| | | Sbjct 2878 TTCGTTTACAATCCCGTCAGATGCTGCGAAGAACGCTAATACATGAGAAACAAAATGGCG 2937 Query 5000 TTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAAC 5059 ||| || | || || ||||| | || ||| || | | ||| || || ||||| Sbjct 2938 TTCACTAGATGTGAGGTTGTTCCAATCATCCATATCCTTCGAAAGATCCACCTCCTCAAC 2997 Query 5060 AGTCCAAAACGACGCTTCCGC 5080 ||||||||| || ||||| || Sbjct 2998 AGTCCAAAATGATGCTTCGGC 3018 >seq202068 Length=1390 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31712 GCGGGATATGATTTATATAGCGCCTACGACTATGTGGTAGAGGCAAAATCTAGAGCGCTA 31771 || |||| |||||| | || |||||||||||||| | || | || | | Sbjct 1107 GCAGGATTCGATTTAAAGAGTGCCTACGACTATGTCATCCCTGCCCACGGTAAGGAAATT 1048 Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831 ||||| |||||||| ||| | || || ||| |||||||| || | || || | Sbjct 1047 GTTAAGACCGATATACAAGTCCAATTGCCCGAAGGATGCTACGGGCGTGTGGCCCCACGC 988 Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891 ||||| |||| | || | || |||||||||||||| || ||||| ||| || ||| Sbjct 987 TCTGGCCTGGCCGCCAAGAATTTCATCGACGTGGGTGCCGGCGTTATTGATGAGGATTAT 928 Query 31892 AGAGGAAACGTTGGAATTGTGTTGTTTAAT 31921 |||| ||||| ||| |||| |||||||| Sbjct 927 CGAGGCAACGTAGGAGTTGTCCTGTTTAAT 898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425388291112268