Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq147342 141 1e-28 seq88474 129 6e-25 seq21991 107 2e-18 seq21034 91.5 2e-13 >seq147342 Length=17694 Score = 141 bits (156), Expect = 1e-28 Identities = 150/195 (77%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 142531 CCCTGTACACCATAAACCCGGCCCATATCGTCTTCACCTTTACGATTTGGGTTTTTTAAC 142590 || || |||||||| || || |||||||||||||||||||| |||| || || || | | Sbjct 2225 CCTTGAACACCATATACACGCCCCATATCGTCTTCACCTTTGCGATGGGGATTATTCAGC 2284 Query 142591 CATGCTTCATTCTCATTGGCATTAGCATTCCAAGTATTTGTACCAAGTGCCCGGAAATCT 142650 ||||||| || || || ||||| |||||||||||||| ||||| | | || || | Sbjct 2285 CATGCTTGGTTTTCGTTTGCATTTGCATTCCAAGTATTACAACCAATTTCACGAAATTGA 2344 Query 142651 GCTGCAGACGACAGA-CCACGAATATAACCCAGCAGTTCGGCAATGGATGCTTTATAAAA 142709 |||||| | || | ||||| | |||||| || ||||| || || | |||||||| || Sbjct 2345 GCTGCA-TTGTCATAGCCACGGAGATAACCGAGAAGTTCAGCTATCGCCGCTTTATAGAA 2403 Query 142710 ACTTTTACGAGTGGT 142724 |||||||||||| || Sbjct 2404 ACTTTTACGAGTCGT 2418 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/195 (71%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 142079 CATCTGTGGTAACCCATGTCTCAACATCTTCCAGAGACTTGATGTTAGGGTTAATAATTA 142138 |||||| || |||||||| || | |||||| | ||||| || || ||||||||||| | Sbjct 1582 CATCTGAAGTTACCCATGTTTCGAGATCTTCTAATGACTTAATTTTGGGGTTAATAATCA 1641 Query 142139 GTTGAGGCTCGTCAAAGGGCTCACGGGAGATCTGTGTCGGCAC-CAT---AGGTAATTGG 142194 | ||| |||| |||||||| | || | | ||| ||| |||||||||| Sbjct 1642 ATGAAGGAGAAGCAAAAGGCTCACGTTTTAGTTG-GACATCACGCATTAAAGGTAATTGG 1700 Query 142195 TCTTCATAGATATGTGCGTTCACAATCTTATAGAACATTTTACCTGGCTTGTTCCGGGTG 142254 | ||||||||||||||| |||||||| |||| | ||||||| || | || || Sbjct 1701 TTTTCATAGATATGTGCATTCACAATTTTATGATAAGCCTTACCTGCTTTATGCCCTGTA 1760 Query 142255 ATTTGAGCCATCAGA 142269 || ||||||| ||| Sbjct 1761 ATACGAGCCATTAGA 1775 >seq88474 Length=25282 Score = 129 bits (142), Expect = 6e-25 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 823 AAATGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 882 Query 66460 TCCAGCTGAGCTAAGAGTGCATTAAT 66485 |||| |||||||||| | ||||| || Sbjct 883 TCCAACTGAGCTAAGGGCGCATTGAT 908 >seq21991 Length=9696 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 139552 GAAATATGCATCATACATACCTTCAACTTCATGCGGACTGAATAATGTGATATAGTCGTT 139611 |||| |||||||||| | |||| ||| || |||||||||||||| |||| | ||| Sbjct 6568 GAAAAATGCATCATAAAGACCTGGAACGTCTGATGGACTGAATAATGTAATATCTTGGTT 6509 Query 139612 TTTAATATAACGTTCGATCATTAAGTCATTAATCTGGACACCATAATCTAAATGACGAAT 139671 |||||| |||| || |||||| | || | || ||||| ||||| | ||| |||| Sbjct 6508 TTTAATCAAACGCTCATACATTAACTTGTTGAGTTGCACACCGTAATCCATATGGCGAAC 6449 Query 139672 ACGGTTTTCATCGATACCTTTATTATTCTTCAGTACGATTAATTTTTCATATTCCAGATG 139731 |||||| | || | || |||||| |||||||| | ||| ||||| ||| || || Sbjct 6448 ACGGTTACCTTCAACCCCACGATTATTTTTCAGTACCAATAAACTTTCAACTTCAAGGTG 6389 Query 139732 CCACATCGGATA 139743 ||| || || || Sbjct 6388 CCAAATAGGGTA 6377 >seq21034 Length=11989 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 52720 GTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCGAACA 52779 || || ||||||| ||| || || ||||||||||||| ||||| ||||| || || ||| Sbjct 3711 GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGTGAGTTGAAACGTACA 3652 Query 52780 GCATAACCAGAAACACGGATAGTCA 52804 |||||||| || ||||||||||||| Sbjct 3651 GCATAACCTGATACACGGATAGTCA 3627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520031986457760