Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_031020.1
Length=163201
Score E
Sequences producing significant alignments: (Bits) Value
seq147342 141 1e-28
seq88474 129 6e-25
seq21991 107 2e-18
seq21034 91.5 2e-13
>seq147342
Length=17694
Score = 141 bits (156), Expect = 1e-28
Identities = 150/195 (77%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 142531 CCCTGTACACCATAAACCCGGCCCATATCGTCTTCACCTTTACGATTTGGGTTTTTTAAC 142590
|| || |||||||| || || |||||||||||||||||||| |||| || || || | |
Sbjct 2225 CCTTGAACACCATATACACGCCCCATATCGTCTTCACCTTTGCGATGGGGATTATTCAGC 2284
Query 142591 CATGCTTCATTCTCATTGGCATTAGCATTCCAAGTATTTGTACCAAGTGCCCGGAAATCT 142650
||||||| || || || ||||| |||||||||||||| ||||| | | || || |
Sbjct 2285 CATGCTTGGTTTTCGTTTGCATTTGCATTCCAAGTATTACAACCAATTTCACGAAATTGA 2344
Query 142651 GCTGCAGACGACAGA-CCACGAATATAACCCAGCAGTTCGGCAATGGATGCTTTATAAAA 142709
|||||| | || | ||||| | |||||| || ||||| || || | |||||||| ||
Sbjct 2345 GCTGCA-TTGTCATAGCCACGGAGATAACCGAGAAGTTCAGCTATCGCCGCTTTATAGAA 2403
Query 142710 ACTTTTACGAGTGGT 142724
|||||||||||| ||
Sbjct 2404 ACTTTTACGAGTCGT 2418
Score = 91.5 bits (100), Expect = 2e-13
Identities = 139/195 (71%), Gaps = 5/195 (3%)
Strand=Plus/Plus
Query 142079 CATCTGTGGTAACCCATGTCTCAACATCTTCCAGAGACTTGATGTTAGGGTTAATAATTA 142138
|||||| || |||||||| || | |||||| | ||||| || || ||||||||||| |
Sbjct 1582 CATCTGAAGTTACCCATGTTTCGAGATCTTCTAATGACTTAATTTTGGGGTTAATAATCA 1641
Query 142139 GTTGAGGCTCGTCAAAGGGCTCACGGGAGATCTGTGTCGGCAC-CAT---AGGTAATTGG 142194
| ||| |||| |||||||| | || | | ||| ||| ||||||||||
Sbjct 1642 ATGAAGGAGAAGCAAAAGGCTCACGTTTTAGTTG-GACATCACGCATTAAAGGTAATTGG 1700
Query 142195 TCTTCATAGATATGTGCGTTCACAATCTTATAGAACATTTTACCTGGCTTGTTCCGGGTG 142254
| ||||||||||||||| |||||||| |||| | ||||||| || | || ||
Sbjct 1701 TTTTCATAGATATGTGCATTCACAATTTTATGATAAGCCTTACCTGCTTTATGCCCTGTA 1760
Query 142255 ATTTGAGCCATCAGA 142269
|| ||||||| |||
Sbjct 1761 ATACGAGCCATTAGA 1775
>seq88474
Length=25282
Score = 129 bits (142), Expect = 6e-25
Identities = 80/86 (93%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 AAATGGTACGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 882
Query 66460 TCCAGCTGAGCTAAGAGTGCATTAAT 66485
|||| |||||||||| | ||||| ||
Sbjct 883 TCCAACTGAGCTAAGGGCGCATTGAT 908
>seq21991
Length=9696
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 139552 GAAATATGCATCATACATACCTTCAACTTCATGCGGACTGAATAATGTGATATAGTCGTT 139611
|||| |||||||||| | |||| ||| || |||||||||||||| |||| | |||
Sbjct 6568 GAAAAATGCATCATAAAGACCTGGAACGTCTGATGGACTGAATAATGTAATATCTTGGTT 6509
Query 139612 TTTAATATAACGTTCGATCATTAAGTCATTAATCTGGACACCATAATCTAAATGACGAAT 139671
|||||| |||| || |||||| | || | || ||||| ||||| | ||| ||||
Sbjct 6508 TTTAATCAAACGCTCATACATTAACTTGTTGAGTTGCACACCGTAATCCATATGGCGAAC 6449
Query 139672 ACGGTTTTCATCGATACCTTTATTATTCTTCAGTACGATTAATTTTTCATATTCCAGATG 139731
|||||| | || | || |||||| |||||||| | ||| ||||| ||| || ||
Sbjct 6448 ACGGTTACCTTCAACCCCACGATTATTTTTCAGTACCAATAAACTTTCAACTTCAAGGTG 6389
Query 139732 CCACATCGGATA 139743
||| || || ||
Sbjct 6388 CCAAATAGGGTA 6377
>seq21034
Length=11989
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/85 (84%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 52720 GTAAATGTACGAGAAATTACATCACGCTGTTGTTCTTTGGTCAGGGAGTTAAAGCGAACA 52779
|| || ||||||| ||| || || ||||||||||||| ||||| ||||| || || |||
Sbjct 3711 GTGAAAGTACGAGTAATAACGTCTTGCTGTTGTTCTTTAGTCAGTGAGTTGAAACGTACA 3652
Query 52780 GCATAACCAGAAACACGGATAGTCA 52804
|||||||| || |||||||||||||
Sbjct 3651 GCATAACCTGATACACGGATAGTCA 3627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520031986457760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |