Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28]
319,196 sequences; 890,457,210 total letters
Query= NC_031946.1
Length=40443
Score E
Sequences producing significant alignments: (Bits) Value
seq219137 129 2e-25
seq188858 100 7e-17
seq6367 80.6 7e-11
>seq219137
Length=2426
Score = 129 bits (142), Expect = 2e-25
Identities = 194/276 (70%), Gaps = 0/276 (0%)
Strand=Plus/Minus
Query 20989 AGAAACAAGAAGAGACGGGTAGCCAGGAACATTATTTCCAAATATTAATTTATCAATAAT 21048
|||||| || | ||| || || || ||||| |||||| ||||||||||||| | ||
Sbjct 1823 AGAAACGAGCAAAGAAGGATAACCCGGAACTGGATTTCCCCATATTAATTTATCTACTAT 1764
Query 21049 CATCCATGCACCGTAAAGGAATGACATACCTGCAATAAACAATCCAATGTAAGTCCATAT 21108
|||||| ||||||||| ||| || | || | ||| | |||||||||||||| |
Sbjct 1763 CATCCAACCACCGTAAATGAACGAAAAGAGCGCGACAAATAGACCAATGTAAGTCCAGAC 1704
Query 21109 GCGGAGCGGAAATGTTGAGAAAGAAGTTATTCCCTCCAGCGCCAGGTTCCATAATTTCCA 21168
||| || ||||| || || || || | ||| || | || |||||||||||||||||
Sbjct 1703 GCGCAGAGGAAAAGTAGAAAAGCTTGTAACTCCTTCTAAGGCAAGGTTCCATAATTTCCA 1644
Query 21169 GCCGTTGAATTTCGAATCACCGGCCACGCGTTCGGCACGGGCATATTTAACAACATCCGT 21228
|| || || || ||||| | | ||| || | | ||| | ||||||||| |
Sbjct 1643 ACCATTAAACTTGCTTTCACCAACAGATCTTTCTGCTCTGTTATACTCAACAACATCAAT 1584
Query 21229 TTTTCCGCCAACCCAACTGAGCACACCCTTCATAAA 21264
||||| || ||||| || | |||||||||||
Sbjct 1583 ATTTCCACCTACCCATGAAAGAATTCCCTTCATAAA 1548
>seq188858
Length=15165
Score = 100 bits (110), Expect = 7e-17
Identities = 167/240 (70%), Gaps = 1/240 (0%)
Strand=Plus/Plus
Query 26755 GAACCTTTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGG 26814
||||||||| || || || | || | || || ||||| ||| || || || |||
Sbjct 14705 GAACCTTTTTTTAGGTATTCACCTGCTACCTCAGCAAGTTTGCCGAAAATAACGACTCGG 14764
Query 26815 TGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTA 26874
||||| || || | || ||| || |||||||| |||||||| ||| || ||
Sbjct 14765 TGCCATTCGGTTTTTTCACGCATCTCACCGGTTTGCTTGTCACGCCAACTTTCAGAAGTT 14824
Query 26875 GCAACTGTAAGGTTTGCAAATGCCGTTCCTGATGGGTGAATATCTGATTTCTGGATCATG 26934
|| | || |||||||| | || || | | || ||| | |||||||||||| ||
Sbjct 14825 GCCAGAGTCAGGTTTGCCACAGCTCCGCC-GTTAGGCATATAACGGATTTCTGGATCTTG 14883
Query 26935 CCCAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCATTTATGCCGCCTG 26994
|| ||| ||| |||| || || ||||||||||||||||| ||||||||| | ||||
Sbjct 14884 TCCTAGGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTATTACTCCTG 14943
>seq6367
Length=7166
Score = 80.6 bits (88), Expect = 7e-11
Identities = 143/204 (70%), Gaps = 10/204 (5%)
Strand=Plus/Minus
Query 34992 TAATTGAGAAACCAAAAGCGGAACGTAATGACCTCGCCATAGCAC--ATATCTCCGGTAG 35049
||||| | || |||||||| || ||||| ||||| || ||||| || ||| ||| |
Sbjct 4338 TAATTAAAAAGCCAAAAGCAGAGCGTAACGACCTTGCGATAGCGGCAATTTCTGCGG--G 4281
Query 35050 CCTGAAAGCGATGGCGAAAGACCTGAAAACTCCAGTTATCTCATTAAGCCAGCTCTCCCG 35109
|| |||| | | || || || | || ||| ||| || ||||||||||||| ||
Sbjct 4280 GCTAAAAGGGTTAGCCAAGCGACTACATACACCAACAATCGCACTAAGCCAGCTCTCACG 4221
Query 35110 CGATGTTGAGAAGCGGCC---AAACAAGCGCC--CGACAAAC-GCAGATTTGCGTGATTC 35163
|||||||| || ||||| |||| | |||| | | | | || || || || |||||
Sbjct 4220 TGATGTTGATAAACGGCCATTAAACCAACGCCGACCAGTAGCTGCTGACTTACGAGATTC 4161
Query 35164 AGGAAGCATTGAACAGGACGCAGA 35187
||| || | || || ||||||||
Sbjct 4160 AGGTAGTTTAGAGCAAGACGCAGA 4137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128805909653560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |