Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hermetia_20illucens_20[genbank_20GCA_5F001014895.1_202015-05-28] 319,196 sequences; 890,457,210 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq220453 154 4e-32 seq8809 152 1e-31 seq106419 145 2e-29 seq129547 114 3e-20 seq157614 105 2e-17 seq179697 86.0 2e-11 >seq220453 Length=1779 Score = 154 bits (170), Expect = 4e-32 Identities = 160/206 (78%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| |||||| | || || ||||| || || | ||||| ||| ||| ||| Sbjct 1711 CAGATTTTCGTTAAAACTTTGACCGGTAAAACCATTACATTGGAGGTTGAACCCTCTGAC 1652 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| || ||||| || || |||||||| ||||| || |||||| Sbjct 1651 ACCATTGAAAACGTCAAGGCTAAAATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAA 1592 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 ||| | ||||||||||| || ||||| |||||||| | || |||| | || || ||| | Sbjct 1591 CGATTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGTAC-CTTGTCTGACTACAACAT 1533 Query 178103 CCAAAAAGAATCAACACTGCATCTTG 178128 |||||| |||||||| || || |||| Sbjct 1532 CCAAAAGGAATCAACTCTTCA-CTTG 1508 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || |||||||| || || | || || || || ||| Sbjct 571 CAGATCTTCGTTAAGACCTTAACTGGAAAAACTATTACATTGGAAGTCGAGCCATCCGAC 512 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || ||| |||||||| ||||| |||||||| ||||| || |||||| Sbjct 511 ACTATCGAGAATGTTAAAGCTAAGATTCAAGACAAGGAAGGAATTCCTCCAGATCAGCAA 452 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || ||||| | ||||||||| | |||||| ||||||||||| | Sbjct 451 CGTCTCATTTTCGCTGGCAAACAATTGGAAGATGGACGCACTCTTTCCGATTATAACATT 392 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| |||||||| || || |||| Sbjct 391 CAAAAGGAATCAACCCTTCA-CTTG 368 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||||| || ||||| || || || | || ||||| ||| || Sbjct 1483 CAAATTTTCGTTAAGACTCTGACCGGAAAGACCATTACATTGGAAGTGGAGCCCTCCGAT 1424 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| || || || ||||| ||||||||||| || || |||||| Sbjct 1423 ACTATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATCCCCCCAGATCAGCAA 1364 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||||||||||||| | |||||||| | || | ||||||| ||| | Sbjct 1363 CGTCTCATTTTCGCCGGAAAACAGTTGGAAGATGGTCGTACCTTATCCGATTACAACATT 1304 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || ||||||||||| ||||| Sbjct 1303 CAGAAAGAATCAACTTTGCAT 1283 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||||| || ||||| || || || | || ||||| ||| || Sbjct 799 CAAATTTTCGTTAAGACTCTGACCGGAAAGACCATTACATTGGAAGTGGAGCCCTCCGAT 740 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| || || || ||||| |||||||| || || || ||||| Sbjct 739 ACTATTGAAAACGTCAAGGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGATCAGCAG 680 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || ||||||||||| || |||||||| | ||| | |||| || ||| | Sbjct 679 CGTCTCATTTTTGCCGGAAAACAACTAGAAGATGGGCGCACTTTGTCCGACTACAACATT 620 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || ||| | || ||| | ||| Sbjct 619 CAGAAGGAGTCTACTCTACATTTGGTGTTGCGTCTC 584 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| |||||| | || ||||| || ||||| | || || || || || Sbjct 1255 CAGATTTTCGTCAAAACTTTAACCGGAAAGACTATCACTTTGGAAGTCGAGCCATCCGAT 1196 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || ||| || ||||||||||| ||||| ||||| || || |||||| Sbjct 1195 ACTATCGAAAATGTTAAAGCTAAAATTCAGGACAAGGAAGGCATCCCACCAGATCAGCAA 1136 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| |||||||| || || | |||||||| | ||| | |||| || ||| | Sbjct 1135 CGTCTTATTTTCGCCGGTAAGCAATTGGAAGATGGGCGCACTTTGTCCGACTACAACATT 1076 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || || || || || || ||| | || ||| | ||| Sbjct 1075 CAGAAGGAGTCTACTCTACATTTGGTGTTGCGTCTC 1040 >seq8809 Length=5998 Score = 152 bits (168), Expect = 1e-31 Identities = 150/194 (77%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || || ||||| || ||||| || || ||| Sbjct 4334 CAGATTTTCGTAAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTCGAGCCTTCGGAC 4393 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || |||||| ||||| || |||||||| ||||| ||||| ||||||||| Sbjct 4394 ACTATCGAAAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCAGACCAGCAA 4453 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| ||||| | ||||||||| | ||||| ||||||| || || Sbjct 4454 CGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACTCTGTCCGATTACAATATC 4513 Query 178104 CAAAAAGAATCAAC 178117 || ||||| || || Sbjct 4514 CAGAAAGAGTCCAC 4527 >seq106419 Length=8549 Score = 145 bits (160), Expect = 2e-29 Identities = 156/205 (76%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || || || || |||||||||||||| || |||||| Sbjct 1660 CAGATTTTCGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTCGAGCCATCAGAC 1601 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || || ||||| |||||||| ||||| || || || || |||||| Sbjct 1600 ACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAGCAA 1541 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||||||||| ||||| | ||||||||| | || ||| | || || ||| || Sbjct 1540 CGTTTGATCTTCGCCGGCAAACAATTGGAAGATGGACGCACCCTTTCGGACTACAACATC 1481 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1480 CAGAAGGAGTCCACCCTTCA-CTTG 1457 >seq129547 Length=22140 Score = 114 bits (126), Expect = 3e-20 Identities = 153/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || || || ||||| | ||||| || || || Sbjct 20069 CAAATCTTCGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTCGAGCTTTCCGAT 20128 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||||||||| ||||| ||||| || |||||||| || || || |||||| Sbjct 20129 ACGATCGAGAACGTCAAGGCTAAGATCCAGGATAAGGAAGGAATTCCCCCAGATCAGCAA 20188 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | |||||||||||||| ||| || || || | || |||| | ||||| ||| | Sbjct 20189 CGTTTGATCTTCGCCGGAAAGTAGCAGGAGGACGGTCGCAC-CTTGTCTGATTACAACAT 20247 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTT 178131 ||| || || || || || || |||| || Sbjct 20248 CCAGAAGGAGTCGACCCTCCA-CTTGGTT 20275 >seq157614 Length=1694 Score = 105 bits (116), Expect = 2e-17 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || ||||| || || || | || || ||| || || Sbjct 452 CAAATCTTCGTCAAGACATTGACTGGAAAGACTATTACGTTGGAAGTAGAACCTTCCGAT 511 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||| || || || ||||| ||||| || || |||||| Sbjct 512 ACCATTGAAAATGTTAAGGCTAAGATCCAAGATAAGGAAGGCATCCCACCAGATCAGCAA 571 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || | || |||||||||||||| | |||||||| | || |||| |||||||||| | Sbjct 572 CGTTTGATTTTCGCCGGAAAACAATTGGAAGATGGTCGCAC-CTTGTCCGATTATAATAT 630 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTT 178132 || || || || ||| ||||| | || || Sbjct 631 TCAGAAGGAGTCTACATTGCATTTAGTATT 660 Score = 93.3 bits (102), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || ||||| || |||||| | ||||| || || ||| Sbjct 39 CAAATCTTCGTTAAGACTTTGACTGGAAAGACCATCACCTTGGAGGTTGAGCCATCCGAC 98 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| || ||||| ||||| || ||||||||||| || |||||| Sbjct 99 ACCATTGAAAATGTCAAGGCTAAAATTCAAGACAAGGAGGGAATCCCTCCAGATCAGCAA 158 Query 178044 CGACTTAT 178051 || || || Sbjct 159 CGTCTNAT 166 >seq179697 Length=2211 Score = 86.0 bits (94), Expect = 2e-11 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||||| || || ||||| || ||||| | ||||||||||| |||||| | ||| Sbjct 1728 GATCAGCAACGTCTCATTTTCGCTGGCAAACAATTGGAAGATGGAAGCACTCTTTCTGAT 1669 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 |||||| | ||||| |||||||| || || |||| Sbjct 1668 TATAACATTCAAAAGGAATCAACCCTCCA-CTTG 1636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1198808302016024