Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq84576 91.5 3e-13
seq31688 84.2 5e-11
>seq84576
Length=9936
Score = 91.5 bits (100), Expect = 3e-13
Identities = 70/83 (84%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 165699 TTAAAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCG 165758
||||| | | ||||| ||||||||||||||||||| ||||| ||||||| |||||
Sbjct 8678 TTAAATCAATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCG 8619
Query 165759 TGGGTTCGAGCCCCACGATGGGC 165781
||||||||||||||||| |||||
Sbjct 8618 TGGGTTCGAGCCCCACGTTGGGC 8596
>seq31688
Length=13661
Score = 84.2 bits (92), Expect = 5e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 9942 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 10001
Query 165770 CCCACGATG 165778
|||||| ||
Sbjct 10002 CCCACGTTG 10010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1056017417099220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |