Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_001317.1
Length=30624
Score E
Sequences producing significant alignments: (Bits) Value
seq31147 100 6e-17
seq31432 80.6 5e-11
>seq31147
Length=2015
Score = 100 bits (110), Expect = 6e-17
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 21465 TGCATCCTCTAAATGGTCGGGTGCAAAGTGCGCATATCGCATGGTCATTTTTATATCTGT 21524
|||||| | | ||| || || || || || | ||| ||||| |||||||| ||||| ||
Sbjct 1435 TGCATCATTAAGATGATCTGGGGCGAAATGGGAATACCGCATTGTCATTTTAATATCGGT 1376
Query 21525 ATGGCCGAGTACGCGCTGCAACACCAAAATATTACCGCCATTCATCATAAAGTGACTAGC 21584
|||||| || | | || || || |||||||| || || ||||||||||||| ||
Sbjct 1375 ATGGCCAAGGATTCTTTGTAATACTAAAATATTTCCACCTGACATCATAAAGTGAGATGC 1316
Query 21585 GAAGGTGTGACGTAAAACGTGGGTAAGTTGTCCTGCCGGTAGTTCGATACCTGTTCTTTC 21644
|| ||||| |||||||| || | ||| | | | |||| || |||||||| | |
Sbjct 1315 AAAAGTGTGGCGTAAAACATGTGATGATTGGCGTTCAGGTAACTCAATACCTGTGCGCTT 1256
Query 21645 CAAAGCTGACCGGAACGCGCCATAACAA 21672
|| || || || || || |||||||
Sbjct 1255 TAATGCAGAACGAAATGCAGAATAACAA 1228
>seq31432
Length=2868
Score = 80.6 bits (88), Expect = 5e-11
Identities = 50/54 (93%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 20977 CTTAAATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGT 21030
|| |||||||||||||||| ||||||||||||||| |||||| |||||||||||
Sbjct 1988 CTAAAATTTGGTGGCCCCTACTGGACTTGAACCAGTGACCAATCGATTATGAGT 2041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97720276649208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |