Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq21713 259 3e-64
>seq21713
Length=22343
Score = 259 bits (286), Expect = 3e-64
Identities = 434/625 (69%), Gaps = 2/625 (0%)
Strand=Plus/Plus
Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592
|||||| ||||| | ||| |||||| | |||| || || |||| || | | || ||
Sbjct 18109 TTAAACTGCCATTTCCATGTTAATTTTCGGGTAAGGATTGTAGTCTTGCATTTCAAAATC 18168
Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652
||| |||| || || |||||| ||| |||| | | || ||||||| ||
Sbjct 18169 ATCAAAAGTAAAATCTTCTATGCATTCAACTTTTCGTTTTATAATGAGCTTTGGAAAAGG 18228
Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712
|| || || |||| ||| ||| || | ||||| |||| || ||| | |||||
Sbjct 18229 TCGTGGCACACGATTCAATTGCTCTTTTAGCGGCTCAATATGATTTAAATAAACATGAGC 18288
Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772
||| |||| || || | ||| ||||||||| || ||| |||| ||||| |||||| |
Sbjct 18289 ATCGCCTAAGGTGTGCACAAAATCTCCAGGCTTTAAATTTGTGATGTGAGCTATCATGTA 18348
Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCT 101832
||| | | || ||| || || || ||||| |||||||| | |||||||| ||||||||
Sbjct 18349 AGTGAGCAAAGCATAACTTGCTATATTAAAAGGCACTCCAAGACCCATATCTGCTGATCT 18408
Query 101833 TTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAATAC-ATGAC 101891
|||||||| ||||| || | | ||||| | || ||||||||| ||| || ||| |
Sbjct 18409 TTGATACAACTGACATGATAATTCTCCATTAGCCACGTAAAATTGA-ATAAGACAATGGC 18467
Query 101892 AAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTC 101951
|||| || | |||||||||||||||| ||||||||| ||| | || | ||
Sbjct 18468 AAGGAGGTAGTGCCATTTTAGGAATGTCGATTGGATTCCAAGCGGTCATAATAATTCGTC 18527
Query 101952 TATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTC 102011
|||| | || || || || || || || | || |||||||| |||| ||| | ||
Sbjct 18528 TATCATTTGGATTGGTGTTAATTTGCTCGATGACTTGCTTTAATTGATCAATTCCCTGTC 18587
Query 102012 CTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCAT 102071
| | |||| | | |||||||||||| || || |||||||| ||||| ||||
Sbjct 18588 CATCGTAATTACTGTGACATGTTTTATATTCTGCCCCTAAGTGCCTCCATTGAAAACCAT 18647
Query 102072 ACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATC 102131
| ||||| || | ||| || | |||| || | ||| || ||||||||| ||| ||
Sbjct 18648 ATACAGGGCCCAAATCGCCAACTTCTCGATCCTCAAATCCTGATTTATCTAAGAATTCTC 18707
Query 102132 TAGATCCATTCGCATCCCAAATGTG 102156
| | | ||| |||||||||||||
Sbjct 18708 TGGTGCTATTTCCATCCCAAATGTG 18732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360664339974794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |