Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq86028 84.2 2e-12 >seq86028 Length=2337 Score = 84.2 bits (92), Expect = 2e-12 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 2709 ATCCAAATAATCAGCCCACCACTGCATCATTAAACGCCGCTCATCCAAATGCTCGGAGGT 2768 |||||| |||||||||||||| |||| ||| | ||||| || || | ||| || | | Sbjct 2308 ATCCAAGTAATCAGCCCACCATTGCACCATCAGTCGCCGTTCCTCAATATGTTCTGCCTT 2249 Query 2769 ATGGATATATGCCGCACGTACATTATTACGCTCTGAGTGGCTCAGTTGCCTCTCTATCGC 2828 ||| ||||| || || | ||| || || ||| |||||||| || | |||| || Sbjct 2248 ATGAATATAAGCGGCTCTTACTGAGTTGCGTTCTTGGTGGCTCATCTGGCGTTCTACTGC 2189 Query 2829 GTCATCACTCCATAACCCCGACTCCCCCAACGCACCACGCGCCATAGTCCTAAA 2882 || | ||||| ||| ||||| ||||| || || |||||| || ||||| Sbjct 2188 ATCCTTCGACCATAGCCCTGACTCAATCAACGAACTACACGCCATTGTTCTAAA 2135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37025994008608