Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq116239 93.3 4e-14
>seq116239
Length=11340
Score = 93.3 bits (102), Expect = 4e-14
Identities = 168/246 (68%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | || |||| ||| | ||||| |||||||||||||| || ||||
Sbjct 4550 TTCCACCGCGTAGACGAAGAACCAAATGAAGTGTGGATTCCTTTTGAATGTTGTAATCCG 4609
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | ||||||| || || || ||| |||| | | || || || |
Sbjct 4610 ACAATGTCCTACCATCCTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTG 4669
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | |||||||||||| |||||| ||| || | | | || ||| |||||
Sbjct 4670 GAATGCCTTCCTTGTCTTGAATCTTTGCTTTAACATTTTCAATTGTGTCAGACGGCTCAA 4729
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAATCTCT 21186
|||| ||||| || || || ||||| ||||| ||||| || |||||||||| ||| |
Sbjct 4730 CCTCCAATGTAATTGTTTTTCCAGTTAAAGTTTTTACAAAAATCTGCATTTTGAGTCTTT 4789
Query 21187 TATAAA 21192
||||
Sbjct 4790 CCTAAA 4795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421573231220504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |