Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq82763 138 2e-27
>seq82763
Length=7752
Score = 138 bits (152), Expect = 2e-27
Identities = 217/306 (71%), Gaps = 6/306 (2%)
Strand=Plus/Plus
Query 189280 AATTGTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAACAAACATTATGATAGTAT 189339
|||| || |||||||| |||||||||||||||||| ||| || ||| ||||||||| |||
Sbjct 3998 AATTATACGAAGAGAATTATCGGATAATTTTTGTTTCTACAATAAAAATTATGATAATAT 4057
Query 189340 CCA--GTCTACTCATTCATGGGCCAGAAAAACATTAGAAGATCACATTAATGATCCTAGA 189397
| | || | | | ||||| |||||| | | || || || ||| ||
Sbjct 4058 CAAAGGTGTTGCAAGT--TGGGCTTTAAAAACTCTTAATGAACATCGAAAAGATAAACGA 4115
Query 189398 AAGTATATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAAC 189457
| ||||| || | | | || | ||| | ||||||||||| ||| |||||
Sbjct 4116 AGTTATATTTACACAAAAGATGAATTAGAATGCTCAAAAACTCATGATGATCTCTGGAAT 4175
Query 189458 GCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGG 189517
| | ||||| || |||| |||||||||||||||| |||||||| |||||||||||
Sbjct 4176 TCAGCTCAAATTCAATTGGTACAAGAAGGAAAAATGCATGGTTTTTTAAGAATGTATTGG 4235
Query 189518 GCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAG-TATCTA 189576
|||||||| || | ||||||||| | |||||||| | || || || || | || ||
Sbjct 4236 GCTAAGAAAATTTTAGAATGGACTGAATCACCTGAAAAAGCATT-AGAAATTGCAATTTA 4294
Query 189577 TTTGAA 189582
||||||
Sbjct 4295 TTTGAA 4300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921658592571760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |