Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq21713 163 4e-35
>seq21713
Length=22343
Score = 163 bits (180), Expect = 4e-35
Identities = 381/569 (67%), Gaps = 8/569 (1%)
Strand=Plus/Minus
Query 70059 GACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGT 70118
|| ||| |||||| |||| || || || || || || |||||||||| || | ||
Sbjct 18674 GAGAAGTTGGCGATTTGGGCCCTGTATATGGTTTTCAATGGAGGCACTTAGGGGC--AGA 18617
Query 70119 ATGTAGACTGCGAGACAGACTATTCG--GGTCAGGGTGTTGATCAATTGCAGACAATCAT 70176
|| || | | |||| | || || ||||| |||||||||| || | ||||
Sbjct 18616 ATATAAAACATGTCACAGTAATTACGATGGACAGGGAATTGATCAATTAAAGCAAGTCAT 18557
Query 70177 TGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGC 70236
|| | || |||||||||| ||||| | || | ||| | | ||||||||
Sbjct 18556 CGAGCAAATTAACACCAATCCAAATGATAGACGAATTATTATGACCGCTTGGAATCCAAT 18497
Query 70237 AGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGA 70296
|| | | ||||||||||||| || || || ||| | ||| |||||| | |
Sbjct 18496 CGACATTCCTAAAATGGCACTACCTCCTTGCCATTGTCTTATTCAATTTTACGTGGCTAA 18437
Query 70297 TGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTT 70356
||| |||| ||||| ||||||| || || || ||||| || || || || ||
Sbjct 18436 TGGAGAATTATCATGTCAGTTGTATCAAAGATCAGCAGATATGGGTCTTGGAGTGCCTTT 18377
Query 70357 TAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGC 70416
||| || ||||| ||| || || | || ||||||| |||||||| | | | |||||
Sbjct 18376 TAATATAGCAAGTTATGCTTTGCTCACTTACATGATAGCTCACATCA-CAAATTTAAAGC 18318
Query 70417 --GCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCA 70474
| | || || || |||||| | ||||| ||||| || ||||||||||| || |||||
Sbjct 18317 CTGGA-GATTTTGTGCACACCTTAGGCGATGCTCATGTTTATTTAAATCATATTGAGCCG 18259
Query 70475 TTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAA 70534
|||| | |||| | | || | ||| |||||||||| ||||| | || |||
Sbjct 18258 CTAAAAGAGCAATTGAATCGTGTGCCACGACCTTTTCCAAAGCTCATTATAAAACGAAAA 18199
Query 70535 GTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATAATAAAAGGTTACGATCCATAC 70594
|||||| || || ||||| | || |||||| ||| ||| ||| |||| |||
Sbjct 18198 GTTGAATGCATAGAAGATTTTACTTTTGATGATTTTGAAATGCAAGACTACAATCCTTAC 18139
Query 70595 CCTAAGATTCCCATGGTTCTGGCTGTTTA 70623
|| || ||| ||||| |||| |||||
Sbjct 18138 CCGAAAATTAACATGGAAATGGCAGTTTA 18110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 739824465687440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |