Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq87768 93.3 8e-14 >seq87768 Length=1553 Score = 93.3 bits (102), Expect = 8e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 271743 GCTCCGTGACCTGGACTCGAACCAGGGACCCAGTGATTAACAGTCACTTGCTCTACCGAC 271802 ||||| || | ||||||||||| | ||||||| ||||||||||| ||||||||||| || Sbjct 60 GCTCCCCGAGCAGGACTCGAACCTGCGACCCAGCGATTAACAGTCGCTTGCTCTACCAAC 119 Query 271803 TGAGCTATCACGGAAT 271818 |||||||||| ||||| Sbjct 120 TGAGCTATCAGGGAAT 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895446339662560