Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq116239 84.2 2e-11
>seq116239
Length=11340
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904
|| || ||||||||||| |||||||||| || ||| | | ||||||| || || ||
Sbjct 4582 GTGGATTCCTTTTGAATGTTGTAATCCGACAATGTCCTACCATCCTCCAATTGCTTTCCA 4641
Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964
||| |||| | | || ||||| || | ||| || ||||| ||| || |||
Sbjct 4642 GCAAAAATCAAACGTTGTTGATCTGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCTTTA 4701
Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024
|| | | | || || ||||| || | ||||| ||||| || |||||||||
Sbjct 4702 ACATTTTCAATTGTGTCAGACGGCTCAACCTCCAATGTAATTGTTTTTCCAGTTAAAGTT 4761
Query 19025 TTGACAAAAATTTGCATTTTAAATCTCTTATAAA 19058
|| |||||||| |||||||| | ||| | ||||
Sbjct 4762 TTTACAAAAATCTGCATTTTGAGTCTTTCCTAAA 4795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413899317935836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |