Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq97124 185 1e-42 >seq97124 Length=1412 Score = 185 bits (204), Expect = 1e-42 Identities = 201/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||||||||| | | | || |||||||||||||| || || ||||| || || Sbjct 581 GCTAAGCGTCATCGTAAAGTGTTGCGTGATAACATCCAAGGTATAACAAAGCCTGCAATT 640 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| ||||||||||||||||||| || ||| | ||||| || | || ||||| | Sbjct 641 CGTCGTTTGGCTCGTCGTGGTGGAGTGAAACGTATTTCTGGTTTAATTTACGAAGAAACA 700 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| ||||| | ||| | | | || |||| ||||||| || ||||| || Sbjct 701 CGTGGTGTATTGAAAGTGTTCTTGGAAAATGTGATCCGTGATGCTGTCACTTATACTGAA 760 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||||| ||||| |||||| | |||||| | || ||||||||||| | ||||| Sbjct 761 CACGCAAAACGCAAGACAGTCACCGCAATGGATGTTGTATATGCATTGAAGAGACAAGGA 820 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 || | | || ||||| ||| ||||| Sbjct 821 CGCACTCTCTACGGTTTCGGAGGTTAA 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78953328362742