Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq97124 185 1e-42
>seq97124
Length=1412
Score = 185 bits (204), Expect = 1e-42
Identities = 201/267 (75%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|||||||||||||| | | | || |||||||||||||| || || ||||| || ||
Sbjct 581 GCTAAGCGTCATCGTAAAGTGTTGCGTGATAACATCCAAGGTATAACAAAGCCTGCAATT 640
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| ||||||||||||||||||| || ||| | ||||| || | || ||||| |
Sbjct 641 CGTCGTTTGGCTCGTCGTGGTGGAGTGAAACGTATTTCTGGTTTAATTTACGAAGAAACA 700
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| ||||| | ||| | | | || |||| ||||||| || ||||| ||
Sbjct 701 CGTGGTGTATTGAAAGTGTTCTTGGAAAATGTGATCCGTGATGCTGTCACTTATACTGAA 760
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||||| ||||| |||||| | |||||| | || ||||||||||| | |||||
Sbjct 761 CACGCAAAACGCAAGACAGTCACCGCAATGGATGTTGTATATGCATTGAAGAGACAAGGA 820
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || ||||| ||| |||||
Sbjct 821 CGCACTCTCTACGGTTTCGGAGGTTAA 847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 78953328362742
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |