Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq116239 87.8 2e-12 >seq116239 Length=11340 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 115269 TTTATAAGAGATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCG 115328 |||| | ||| | |||||||| |||||||| ||||| | || |||||||| ||||| Sbjct 4795 TTTAGGAAAGACTCAAAATGCAGATTTTTGTAAAAACTTTAACTGGAAAAACAATTACAT 4736 Query 115329 TCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAG 115388 | || ||| | ||||| ||| | | || ||| ||| ||| || || |||| Sbjct 4735 TGGAGGTTGAGCCGTCTGACACAATTGAAAATGTTAAAGCAAAGATTCAAGACAAGGAAG 4676 Query 115389 GCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAA 115448 || | || ||||| ||| | | |||| ||| || || ||||| || |||| | | Sbjct 4675 GCATTCCACCAGATCAACAACGTTTGATTTTTGCTGGAAAGCAATTGGAGGATGGTAGGA 4616 Query 115449 CCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 | || | ||||| ||||||||||| || || || | ||| |||| Sbjct 4615 CATTGTCGGATTACAACATTCAAAAGGAATCCACACTTCATTTGGT 4570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424653019899280