Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_008193.1 Length=30505 Score E Sequences producing significant alignments: (Bits) Value seq31147 86.0 1e-12 >seq31147 Length=2015 Score = 86.0 bits (94), Expect = 1e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 1268 TGGCGCGAAATGTGCATACTTCATTGTCATTTCAATTGTTGAGTGTCCGAGAATCTCTTT 1327 ||| |||||||| | |||| ||||||||||| ||| | || || || || ||||| Sbjct 1417 TGGGGCGAAATGGGAATACCGCATTGTCATTTTAATATCGGTATGGCCAAGGAT-TCTTT 1359 Query 1328 -TAATACTAAAATGTTTCCCCCGTTCATCATAAAATGACTGGCGAAAGTATGGCGTAAAA 1386 |||||||||||| ||||| || ||||||||| ||| || ||||| |||||||||| Sbjct 1358 GTAATACTAAAATATTTCCACCTGACATCATAAAGTGAGATGCAAAAGTGTGGCGTAAAA 1299 Query 1387 CGTG 1390 | || Sbjct 1298 CATG 1295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97340079404676