Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq8255 91.5 1e-13
seq71188 87.8 2e-12
>seq8255
Length=4873
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 25020 TTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAG 25079
||||| ||||| ||||||| | ||||| || | | ||||| || | | ||||
Sbjct 388 TTGACTGGTAAGACCATCACTTTGGAAGTCGAACCAACAGACACCATTAAA--AATGAAA 445
Query 25080 CAA--AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCG 25137
| ||||| ||||||||| | | ||||| |||||||||| | ||||| || |
Sbjct 446 AACCTAAAATTCTAGACAAAGAAAGAGTCCCACCAGACCAACAGCATTTAATTTTCGCTG 505
Query 25138 GCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGC 25197
|||||||||| |||||| ||| || | ||||||||| |||||||| ||||| || |
Sbjct 506 GCAAACAATTGAAAGATGGTCGTACCCTCTTCGATTACAACATTCAAAAGGAATCAACCC 565
Query 25198 TACATTTAGTGCT 25210
| || || || ||
Sbjct 566 TTCACTTGGTCCT 578
>seq71188
Length=12772
Score = 87.8 bits (96), Expect = 2e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 105559 CACGGATTCCATGTACACGAATTCGGTGATACCAGCAATGGCTGTACATCAGCAGGCGAG 105618
|| |||||||||||||||||||||||||||| || |||||| |||||||| || || | |
Sbjct 1493 CATGGATTCCATGTACACGAATTCGGTGATAACACCAATGGGTGTACATCTGCTGGAGCG 1552
Query 105619 CATTTTAATCC 105629
|| ||||||||
Sbjct 1553 CACTTTAATCC 1563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432624049726610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |