Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq98992 91.5 1e-13 >seq98992 Length=2903 Score = 91.5 bits (100), Expect = 1e-13 Identities = 71/81 (88%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 115526 AATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAG 115583 |||| |||||||| |||||||||||||||| |||||||||||||||| | ||||||| Sbjct 373 AATG-CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAT 315 Query 115584 GAACCAAAACTGATATATTGA 115604 |||||| |||||||||| ||| Sbjct 314 GAACCATAACTGATATAATGA 294 Score = 91.5 bits (100), Expect = 1e-13 Identities = 71/81 (88%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 114329 AATGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAG 114386 |||| |||||||| |||||||||||||||| |||||||||||||||| | ||||||| Sbjct 373 AATG-CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAT 315 Query 114387 GAACCAAAACTGATATATTGA 114407 |||||| |||||||||| ||| Sbjct 314 GAACCATAACTGATATAATGA 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396417363941788