Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq69808 161 1e-34
>seq69808
Length=9325
Score = 161 bits (178), Expect = 1e-34
Identities = 478/728 (66%), Gaps = 13/728 (2%)
Strand=Plus/Minus
Query 113902 ATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGG 113961
||| || |||||||| ||||| | | || | |||||||||| | || || ||
Sbjct 7932 ATTAACTACAACAAATTCACCAGATAATACACGACGATGATAGATATTTGATGTATAAGG 7873
Query 113962 CTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCAT 114021
|||||| | || || ||||| || ||||| || || || ||||| ||||| ||||| ||
Sbjct 7872 CTCAAATGATTCGTTATTACCTAAAATTTGTGCTGTTGATGCTGTTGGCATTGGTGCAAT 7813
Query 114022 GAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGT--CG 114079
| | || |||| ||| | || |||| ||| || || | | ||| | |
Sbjct 7812 TAACAAAGAATTTCGGATACCATGTTGTTTAATTTTTTCTTTAAGTTCATTCCAATTCCA 7753
Query 114080 TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGC 114139
||| | || || || | | |||||||||| | || || ||||||||| ||||
Sbjct 7752 TAGATCAG-TTGGTGTTTTATT-CCACATATCATATTGAAGTATACCTTGGCTAACTGGT 7695
Query 114140 GATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGG 114199
||||| ||| |||| || |||| || | | || || |||||| | || ||||| |
Sbjct 7694 GATCCATCATATGTTTCATATGAACCATATAATTCAGCTAATTCGCAACTAGCCTCTAAT 7635
Query 114200 GCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 114259
|| | | ||| ||||| ||||| || | ||| | | || || || || |||
Sbjct 7634 GCACCATAATAAATTGTTTCAAATATTTGTTGATTTAATTTCTGTGCTTCTTCACTTTCA 7575
Query 114260 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 114319
| | | || ||||||||| |||| || | ||||| || || | ||||||||
Sbjct 7574 TATGGGTAACGCATTAAAATAAATGCATCAGCTAAGCCTTGTACGCCAATACCAATTGGT 7515
Query 114320 CGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAAC 114378
||||| | | ||| || ||| || ||| | |||||| |||| |||| ||||
Sbjct 7514 CGATGACGAAAATTTGATTTTTTTGCT-TCTGGTAAAGGATAATAATTAATATCAATAAT 7456
Query 114379 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 114438
|||| | |||| | || |||| ||||| | ||| | ||| |||| ||||| | |
Sbjct 7455 TTTATTCAAATTTCTTGTAACAATTTTTGTAACTTCTTTAAGTTTTTTAAAATCATATTT 7396
Query 114439 GCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 114498
| ||| | | ||| || || | || ||||| || | |||||| |||| |
Sbjct 7395 TTTA---TCTGCTGTAACAAACATATTTAAAGCAATTGAAGCTAAATTACAAACAGCTAT 7339
Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558
||||| | | || || | |||||| ||||||| ||| || |||||||||||
Sbjct 7338 TTCATCTGGTGCTGAATATTCAACAATTTCTGTACACAGATTACTACATTTAATGGTGCC 7279
Query 114559 CAAGTTCTTTTGATTTGACTTTGTG--TTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616
| ||| | |||||| ||||| | ||||||||||| || || | ||| ||||| ||
Sbjct 7278 AATGTTTTGTTGATT--ACTTTTTCGATTACACGCATCTTTATATAACATATATGGAGTA 7221
Query 114617 CCCGTCTC 114624
|| || ||
Sbjct 7220 CCAGTTTC 7213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596358304365520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |