Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq26843 95.1 1e-14 seq102307 87.8 2e-12 >seq26843 Length=8439 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2847 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 2788 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 2787 TACTACCGAGGA 2776 >seq102307 Length=8650 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/72 (88%), Gaps = 2/72 (3%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| |||||||||||||||||| || ||||| ||||||| Sbjct 7733 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGNGG--ATACTTACCACTA 7790 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 7791 TACTACCGAGGA 7802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542307712412960