Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_010495.1
Length=45051
Score E
Sequences producing significant alignments: (Bits) Value
seq30817 104 7e-18
>seq30817
Length=4284
Score = 104 bits (114), Expect = 7e-18
Identities = 178/256 (70%), Gaps = 13/256 (5%)
Strand=Plus/Minus
Query 32929 CCTTCTATATAAACCTGCGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTTT 32988
||||| ||||| || || || ||||| || || || ||||||||||| || | |||
Sbjct 274 CCTTCGATATAGACTTGTGAGCCTTTTTTCAGGTATTCCCCTGCAACTTCAGCTAATTTG 215
Query 32989 CCGAAGATAACAACTCGATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTGTCT 33048
||||| ||||| || || |||||||| || | ||| | | || || |||||||||||
Sbjct 214 CCGAAAATAACCACACGGTGCCATTCGGTTTTTTCACGCATCTCACCGGTTTGCTTGTCA 155
Query 33049 TTCCACTGCTCAGATGTTGCAACAGAAAGGTTCGCAATTGCAGAGCC-TGATGCTGAATA 33107
||| ||||| ||||| | || ||||| || | || ||| | | || |
Sbjct 154 CGCCAACTTTCAGAAGTTGCCAGAGTCAGGTTTGCCACCGCTCCGCCGTTAGGC-----A 100
Query 33108 TTTAAC----TTCAGGGTCATTTCCGAGAGTGCCGACAATGATTACTTTATTTACGCC-- 33161
| |||| |||||| || | || || | |||| || |||||||||||||||||
Sbjct 99 TATAACGGATTTCAGGATCTTGCCCTAGGTTACCGATAAGAATTACTTTATTTACGCCTC 40
Query 33162 -GCGTGCCATTTATTA 33176
|| |||||||||||
Sbjct 39 TGCTGGCCATTTATTA 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143813601412764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |