Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq69808 235 7e-57
>seq69808
Length=9325
Score = 235 bits (260), Expect = 7e-57
Identities = 478/699 (68%), Gaps = 13/699 (2%)
Strand=Plus/Plus
Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355
|||||| || |||||||| ||||||||| | || ||||| || ||||| | ||| |||
Sbjct 7204 TCTCAAGTTGAAACTGGTACTCCATATATGTTATATAAAGATGCGTGTAATCGAAAAAGT 7263
Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415
|||||| | || | || || || || || || ||||||||||| | |||| |
Sbjct 7264 AATCAACAAAACATTGGCACCATTAAATGTAGTAATCTGTGTACAGAAATTGTTGAATAT 7323
Query 112416 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 112475
||| |||||| | ||||| ||||| | || ||||| ||| | || |||||
Sbjct 7324 TCAGCACCAGATGAAATAGCTGTTTGTAATTTAGCTTCAATTGCTTT----AAATATGTT 7379
Query 112476 -GATCCAG-AGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCA 112533
| | ||| ||| ||| | || ||||| | ||||||| | |||||||| |||| ||| |
Sbjct 7380 TGTTACAGCAGATAAAAA-ATATGATTTTAAAAAACTTAAAGAAGTTACAAAAATTGTTA 7438
Query 112534 CAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAA 112592
||| ||| | || | | ||||||||| |||| ||| || | ||| || |||
Sbjct 7439 CAAGAAATTTGAATAAAATTATTGATATTAATTATTATCCTTTACCAGAA-GCAAAAAAA 7497
Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT 112652
|| ||| | | || || ||||||||| | || || ||||| | || |||| ||| |||
Sbjct 7498 TCAAATTTTCGTCATCGACCAATTGGTATTGGCGTACAAGGCTTAGCTGATGCATTTATT 7557
Query 112653 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAG 112712
| || || ||| ||| || ||||| || || | ||| | ||||||||
Sbjct 7558 TTAATGCGTTACCCATATGAAAGTGAAGAAGCACAGAAATTAAATCAACAAATATTTGAA 7617
Query 112713 ACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATAT 112772
||||| ||| | | || | ||||| |||| || || || || | ||||| |||||
Sbjct 7618 ACAATTTATTATGGTGCATTAGAGGCTAGTTGCGAATTAGCTGAATTATATGGTTCATAT 7677
Query 112773 GAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGT 112832
||||| | ||| || || |||| | ||||| | ||||||| |||||||||| ||
Sbjct 7678 GAAACATATGATGGATCACCAGTTAGCCAAGGTATACTTCAATATGATATGTGG-AATAA 7736
Query 112833 GAGACCAAGCTTCACTACG--ACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTC 112890
| ||||| || ||| | | ||| | | || || ||| || || | | |||
Sbjct 7737 AACACCAA-CTGATCTATGGAATTGGAATGAACTTAAAGAAAAAATTAAACAACATGGTA 7795
Query 112891 TTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTA 112950
| || || | | || || ||||||||||||||||| || || |||||||| || ||||
Sbjct 7796 TCCGAAATTCTTTGTTAATTGCACCAATGCCAACAGCATCAACAGCACAAATTTTAGGTA 7855
Query 112951 ATAATGAATGCTTTGAACCCTACACGACGAACATCTATC 112989
|||| |||| ||||| || || || | || |||||||
Sbjct 7856 ATAACGAATCATTTGAGCCTTATACATCAAATATCTATC 7894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 619708134531680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |