Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_015269.1
Length=118351
Score E
Sequences producing significant alignments: (Bits) Value
seq111833 102 6e-17
>seq111833
Length=3756
Score = 102 bits (112), Expect = 6e-17
Identities = 137/188 (73%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 46321 CCCATATCATCCTCACCTTTACGGTATGGATTGTCTAGCCAAGCTGAGTTTTCATTTGCA 46380
||||| ||||| ||||||||||| | ||||| | || ||| ||| ||||||||| |||
Sbjct 1557 CCCATGTCATCTTCACCTTTACGATGGGGATTTTTTATCCATGCTTGGTTTTCATTCGCA 1616
Query 46381 TTAGCATTCCATGTGTTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCATACCCACGT 46440
|| || |||||||| || |||||| | || || || ||||| ||||| |||||
Sbjct 1617 TTGGCGTTCCATGTATTGCAACCAATTTCACGAAACTGGGCTGCGTTATCATAGCCACGA 1676
Query 46441 AGATACCCAATCATTTCCATTATTGCTTGTTTTGCAAACGC-CTTACGAGTAGTAATAAG 46499
|| ||||||| | || ||||| | |||| ||| || |||||||| ||||| |
Sbjct 1677 AGGTACCCAAGAAGCTCAGCAATTGC-AGCTTTGTAAAAGCTTTTACGAGTCGTAATCAA 1735
Query 46500 GGGGAATT 46507
|| ||||
Sbjct 1736 AGGAAATT 1743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 377983359090608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |