Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq30817 95.1 2e-15 >seq30817 Length=4284 Score = 95.1 bits (104), Expect = 2e-15 Identities = 191/281 (68%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 2001 ACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTTTTT 2060 ||||| | ||| || || || |||||||| |||||| |||||| || |||| | Sbjct 340 ACAACCACTTCTGTTGTATAGCGATCTTGACCGCTTTGGTCCTGCCATTTACGTGTTTGT 281 Query 2061 AACTTGCCTTCAATGTATAGCTTACTACCCTTACGT-ACATACTCGCCGATTATTTCAGC 2119 ||| ||||| || || | ||| | |||| | | || || || | |||||| Sbjct 280 AACGAACCTTCGATATAGA-CTTGTGAGCCTTTTTTCAGGTATTCCCCTGCAACTTCAGC 222 Query 2120 TAACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTGCT 2179 ||| || || |||| ||| | | |||||| ||||||| ||| ||| || || Sbjct 221 TAATTTGCCGAAAATAACCACACGGTGCCATTCGGTTTTTTCACGCATCTCACCGGTTTG 162 Query 2180 TTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTAGG 2239 || || ||| |||| |||||| ||||| ||||||||||| || |||||||| Sbjct 161 CTTGTCACGCCAACTTTCAGAAGTTGCCAGAGTCAGGTTTGCCACCGCTCCGCCGTTAGG 102 Query 2240 TATGTAACGAATTTCTGGATCTTGACCAGCATTACCAATAA 2280 || ||||| ||||| |||||||| || ||||| |||| Sbjct 101 CATATAACGGATTTCAGGATCTTGCCCTAGGTTACCGATAA 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97806539889564