Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq34035 84.2 1e-11 >seq34035 Length=19351 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| || |||||||| || || | | ||||| |||| || || ||||| || || || Sbjct 10547 TCTTTTTGGATGTTATAATCAGATAAGGTTCGTCCATCCTCAAGTTGTTTACCAGCGAAA 10488 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 |||| ||||| || ||| | || | || || || || ||||| ||| || | Sbjct 10487 ATTAAACGTTGTTGATCTGGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTAACATTT 10428 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || || || || | |||||||| || || || ||||| || ||| Sbjct 10427 TCAATTGTATCAGAGGGTTCGACCTCAAGTGTTATGGTCTTCCCTGTAAGAGTTTTAACA 10368 Query 34971 AAGATCTGCATATT 34984 || ||||||||||| Sbjct 10367 AATATCTGCATATT 10354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324106226021232