Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_018454.1
Length=39974
Score E
Sequences producing significant alignments: (Bits) Value
seq101259 132 1e-26
>seq101259
Length=2429
Score = 132 bits (146), Expect = 1e-26
Identities = 184/255 (72%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 1603 AACAGCATTTCTGGACCCTTATGCCCCATCTGACCTGCAAGCCAGAAAAGGTTTACTCCC 1662
|||| |||||| || |||||||||||||| || || || ||||| || || || | ||
Sbjct 782 AACAACATTTCAGGCCCCTTATGCCCCATTTGTCCAGCTAGCCAAAACAGATTAGCACCT 841
Query 1663 TGGCTGATGTGTTTGGTGGCGAATGTATGGCGGGTCTGGTAGGGATTACGGTACCGAACG 1722
|||||||| ||| | ||||| || ||||| | || || || ||||| || || | |
Sbjct 842 TGGCTGATATGTCTCGTGGCAAAGGTATGCCTAGTTTGATATGGATTTCGATATCTGATA 901
Query 1723 CCAGCTTTTTTCAGGGTTGGCACCCATGCtttttttCGGATAGCGTCTGCGTTCGCCCAA 1782
|| ||||| || || ||||||||||||||||| |||| ||| || || || |||| |
Sbjct 902 CCTGCTTTCTTTAGCGTTGGCACCCATGCTTTCTTTCTGATTGCATCGGCACCTGCCC-A 960
Query 1783 GGCTCT-CCCGTTTTCGGGTCGCTGAATATGAACTCGCTTTTCATAAAGGTGTATTGTTT 1841
|||| | ||||||||||| || || | || ||||| || ||| |||| ||
Sbjct 961 GGCTTTATTTGTTTTCGGGTCTTCAAAAATCACATCATCTTTCAGGAACGTGAATTGCTT 1020
Query 1842 CTGCGCCAGCAGGGC 1856
|||| | ||||||
Sbjct 1021 CTGCTCATTCAGGGC 1035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127592917291008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |