Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_019488.1
Length=34117
Score E
Sequences producing significant alignments: (Bits) Value
seq31147 109 1e-19
seq7599 89.7 1e-13
>seq31147
Length=2015
Score = 109 bits (120), Expect = 1e-19
Identities = 138/187 (74%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 1453 GCATCTTCAAGATGTTCTGGTGCGAAATGGGCATAGACCATTGTCATTTTTATATCTGAG 1512
||||| | |||||| ||||| |||||||||| ||| |||||||||||| ||||| |
Sbjct 1434 GCATCATTAAGATGATCTGGGGCGAAATGGGAATACCGCATTGTCATTTTAATATCGGTA 1375
Query 1513 TGCCCTAAAATATCTCTC-AATACAAGAATATTTCCGCCATTCATCATAAAGTGACTAGC 1571
|| || | || ||| | ||||| | ||||||||| || ||||||||||||| ||
Sbjct 1374 TGGCCAAGGAT-TCTTTGTAATACTAAAATATTTCCACCTGACATCATAAAGTGAGATGC 1316
Query 1572 GAATGTATGGCGCAATACATGCGTGCACTGGCCCTCTGGCAAGTCAATACCTGCTCTTTT 1631
|| || ||||| || ||||| | | |||| || || || |||||||||| | ||
Sbjct 1315 AAAAGTGTGGCGTAAAACATGTGATGATTGGCGTTCAGGTAACTCAATACCTGTGCGCTT 1256
Query 1632 TACTGCA 1638
|| ||||
Sbjct 1255 TAATGCA 1249
>seq7599
Length=2269
Score = 89.7 bits (98), Expect = 1e-13
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 34049 TTTCACGTAACCCCTTGTTTTATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAA 34108
||||||| ||||||||| |||| |||||||||||||||||||||||||||| ||||| ||
Sbjct 100 TTTCACGCAACCCCTTGATTTAATTGGTGGAGCTGGCGGGAGTTGAACCCGAGTCCGTAA 41
Query 34109 TT 34110
||
Sbjct 40 TT 39
Score = 86.0 bits (94), Expect = 1e-12
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 16 TTTCACGTAACCCCTTGTTATATTTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAA 75
||||||| ||||||||| | || |||||||||||||||||||||||||||| ||||| ||
Sbjct 100 TTTCACGCAACCCCTTGATTTAATTGGTGGAGCTGGCGGGAGTTGAACCCGAGTCCGTAA 41
Query 76 TT 77
||
Sbjct 40 TT 39
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 108880184003412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |