Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq114023 86.0 6e-12 >seq114023 Length=3443 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 147616 ATGATGGTGATCCTGATTGGGTTTGAACCAATGACCAATCGATTATGAGTCGACTGCTCT 147675 ||||||||| ||| ||||| | ||||||||||||| || ||||||| || |||||| Sbjct 2872 ATGATGGTGGACCTTATTGGACTCGAACCAATGACCATCCGGTTATGAGCCGGATGCTCT 2931 Query 147676 AACCGACTGAGCTACAGGACCAAATTA 147702 |||| ||||||||| ||| ||||| || Sbjct 2932 AACCAACTGAGCTAAAGGTCCAAAATA 2958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509817936412160