Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_019932.1
Length=29564
Score E
Sequences producing significant alignments: (Bits) Value
seq31432 96.9 7e-16
seq31147 96.9 7e-16
>seq31432
Length=2868
Score = 96.9 bits (106), Expect = 7e-16
Identities = 61/66 (92%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 20132 CTCATAATCGCTTGGTCGCTGGTTCAAGTCCAGCAGGGGCCACCAGATTTTAGCTGCTAA 20191
|||||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| |||
Sbjct 2040 CTCATAATCGATTGGTCACTGGTTCAAGTCCAGTAGGGGCCACCAAATTTTAGCTGTTAA 1981
Query 20192 ATCAGC 20197
||||||
Sbjct 1980 ATCAGC 1975
>seq31147
Length=2015
Score = 96.9 bits (106), Expect = 7e-16
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 19783 TTGTTATGGGGCTTTTCGATCTGCACTCGAAAGAACAGGAATTGAATTACCAGCCGGTCA 19842
||||||| || ||||| |||||| | | | ||||| ||||| ||||| | | ||
Sbjct 1228 TTGTTATTCTGCATTTCGTTCTGCATTAAAGCGCACAGGTATTGAGTTACCTGAACGCCA 1287
Query 19843 ACTTACCCACGTGCTGCGACATACGTTTGCAAGTCACTTTATGATGAACGGGGGAAACCT 19902
| | || || | || || || |||||| ||||||||||||| || ||||| |
Sbjct 1288 ATCATCACATGTTTTACGCCACACTTTTGCATCTCACTTTATGATGTCAGGTGGAAATAT 1347
Query 19903 TTTAGTTTTGCAGCGGGTATTAGGCCATACAGACATAAAAATGACTATGCGATATGCTCA 19962
|||||| || || | | | |||||||| || || |||||||| ||||| ||| | ||
Sbjct 1348 TTTAGTATTACAAAGAATCCTTGGCCATACCGATATTAAAATGACAATGCGGTATTCCCA 1407
Query 19963 CTTTGCGCCCGATCATCT 19980
|| || || ||||||||
Sbjct 1408 TTTCGCCCCAGATCATCT 1425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94333645731528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |