Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29] 133,294 sequences; 516,230,974 total letters Query= NC_020482.1 Length=39921 Score E Sequences producing significant alignments: (Bits) Value seq132814 80.6 7e-11 >seq132814 Length=1592 Score = 80.6 bits (88), Expect = 7e-11 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 5599 TGGTGGAATTGGTAGACACGCCAGTCTTAGGAACTGGTGTCGCAAGACGTGTAGGTTCAA 5658 ||||| |||||||||||| ||||| ||||||| |||||| || ||| ||||||||||| | Sbjct 901 TGGTGAAATTGGTAGACATGCCAGACTTAGGATCTGGTGCCGAAAGGCGTGTAGGTTCGA 842 Query 5659 ATCCTAT 5665 |||||| Sbjct 841 GTCCTAT 835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127423585745124