Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Holcocephala_20fusca_20[genbank_20GCA_5F001015215.1_202015-05-29]
133,294 sequences; 516,230,974 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq130109 100 4e-16
seq981 86.0 8e-12
>seq130109
Length=4333
Score = 100 bits (110), Expect = 4e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 23090 GAAATCACGGAGATGGATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCTTTTT 23149
|| |||| || |||||||| |||||||||| || |||||| | | |||||||| ||||
Sbjct 2891 GACATCATGGTGATGGATACGATTTTGATGGCCCGGGTCAAGTGCTTGCTCATGCGTTTT 2950
Query 23150 TCCCTGGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAAATTGG 23202
|||||||| || | || || ||||| ||||||||| |||||||||||||
Sbjct 2951 ATCCTGGTACAGGGCGTGGTGGGGATGCGCATTTTGATGAAGAAGAAAATTGG 3003
>seq981
Length=15247
Score = 86.0 bits (94), Expect = 8e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 165951 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAAC 166010
|||| || ||||||||| ||| | ||||| ||| | | | ||| | |||||||||
Sbjct 5509 TTAAAGTCGCTCAATTAGCTGGCTCAGTTGCTGAAAAGTCTGCATATCATCATGGTGAAG 5568
Query 166011 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 166070
| |||||| || || | || || || ||| ||||||||||| |||||||||||
Sbjct 5569 CATCTTTATGCATGACAATTGTAAATTTAGCACAAAATTTTGTTGGTTCAAATAATATAA 5628
Query 166071 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCTG 166130
||||| || || || ||||||||||| | || || || |||||||| |||
Sbjct 5629 ATTTACTGGAGCCACGAGGACAATTTGGTACACGTTTGCTTGGTGGAAAAGATTCAGCTA 5688
Query 166131 CATCAAGATATATTT 166145
|| | |||||||
Sbjct 5689 GTGCACGTTATATTT 5703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 631435761640720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |